Gene : Glyma.03G224500 G. max Wm82.a2.v1
Defline:  (1 of 8) 6.1.1.15 - Proline--tRNA ligase / Prolyl-tRNA synthetase Genomic Order:  2245
Name:  ? Glyma.03G224500 Secondary Identifier:  ? PAC:30515865
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax TRNA-CHARGING-PWY Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G224500 0.5kb upstream 0.5kb upstream 5309 true Chr03: 42676017-42681325 Glycine max
Glyma.03G224500 0.5kb upstream 0.5kb upstream 500 false Chr03: 42676017-42676516 Glycine max
Glyma.03G224500 0.5kb downstream 0.5kb downstream 5309 true Chr03: 42676517-42681825 Glycine max
Glyma.03G224500 0.5kb downstream 0.5kb downstream 500 false Chr03: 42681326-42681825 Glycine max
Glyma.03G224500 1.0kb upstream 1.0kb upstream 5809 true Chr03: 42675517-42681325 Glycine max
Glyma.03G224500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 42675517-42676516 Glycine max
Glyma.03G224500 1.0kb downstream 1.0kb downstream 5809 true Chr03: 42676517-42682325 Glycine max
Glyma.03G224500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 42681326-42682325 Glycine max
Glyma.03G224500 2.0kb upstream 2.0kb upstream 6809 true Chr03: 42674517-42681325 Glycine max
Glyma.03G224500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 42674517-42676516 Glycine max
Glyma.03G224500 2.0kb downstream 2.0kb downstream 6809 true Chr03: 42676517-42683325 Glycine max
Glyma.03G224500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 42681326-42683325 Glycine max
Glyma.03G224500 5.0kb upstream 5.0kb upstream 9809 true Chr03: 42671517-42681325 Glycine max
Glyma.03G224500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 42671517-42676516 Glycine max
Glyma.03G224500 5.0kb downstream 5.0kb downstream 9809 true Chr03: 42676517-42686325 Glycine max
Glyma.03G224500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 42681326-42686325 Glycine max
Glyma.03G224500 10.0kb upstream 10.0kb upstream 14809 true Chr03: 42666517-42681325 Glycine max
Glyma.03G224500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 42666517-42676516 Glycine max
Glyma.03G224500 10.0kb downstream 10.0kb downstream 14809 true Chr03: 42676517-42691325 Glycine max
Glyma.03G224500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 42681326-42691325 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308357 5265 Fabidae View MSA
124064223 5270 Rosid View MSA
123739091 5271 Pentapetalae View MSA
122787738 5272 Eudicot View MSA
122046547 5273 Angiosperm View MSA
121346675 5274 Embryophyte View MSA
123428629 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.3265 0.0 95.5941 High  
cufflinks 34.8703 0.0 97.2101 High  
cufflinks 22.5149 0.0 60.8336 High Low
cufflinks 34.9558 0.0 97.6449 High  
cufflinks 64.0266 0.0 193.278 High  
cufflinks 80.6632 0.0 253.507 High High
cufflinks 58.8248 0.0 175.311 High  
cufflinks 40.8122 0.0 115.874 High  
cufflinks 59.3202 0.0 176.969 High  
cufflinks 22.35     High  
cufflinks 12.018     High Low
cufflinks 15.457     High  
cufflinks 52.61     High High
cufflinks 60.794     High High
cufflinks 10.831     High Low
cufflinks 20.991     High  
cufflinks 19.29     High  
cufflinks 18.898     High  
cufflinks 20.349     High  
cufflinks 17.273     High  
cufflinks 16.836     High  
cufflinks 18.596     High  
cufflinks 20.242     High  
cufflinks 16.135     High  
cufflinks 19.351     High  
cufflinks 18.787     High  

0 Strain