Gene : Glyma.03G224200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13495 - NEFA-INTERACTING NUCLEAR PROTEIN NIP30 Genomic Order:  2242
Name:  ? Glyma.03G224200 Secondary Identifier:  ? PAC:30517026
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G224200 0.5kb upstream 0.5kb upstream 4414 true Chr03: 42650866-42655279 Glycine max
Glyma.03G224200 0.5kb upstream 0.5kb upstream 500 false Chr03: 42654780-42655279 Glycine max
Glyma.03G224200 0.5kb downstream 0.5kb downstream 4414 true Chr03: 42650366-42654779 Glycine max
Glyma.03G224200 0.5kb downstream 0.5kb downstream 500 false Chr03: 42650366-42650865 Glycine max
Glyma.03G224200 1.0kb upstream 1.0kb upstream 4914 true Chr03: 42650866-42655779 Glycine max
Glyma.03G224200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 42654780-42655779 Glycine max
Glyma.03G224200 1.0kb downstream 1.0kb downstream 4914 true Chr03: 42649866-42654779 Glycine max
Glyma.03G224200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 42649866-42650865 Glycine max
Glyma.03G224200 2.0kb upstream 2.0kb upstream 5914 true Chr03: 42650866-42656779 Glycine max
Glyma.03G224200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 42654780-42656779 Glycine max
Glyma.03G224200 2.0kb downstream 2.0kb downstream 5914 true Chr03: 42648866-42654779 Glycine max
Glyma.03G224200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 42648866-42650865 Glycine max
Glyma.03G224200 5.0kb upstream 5.0kb upstream 8914 true Chr03: 42650866-42659779 Glycine max
Glyma.03G224200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 42654780-42659779 Glycine max
Glyma.03G224200 5.0kb downstream 5.0kb downstream 8914 true Chr03: 42645866-42654779 Glycine max
Glyma.03G224200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 42645866-42650865 Glycine max
Glyma.03G224200 10.0kb upstream 10.0kb upstream 13914 true Chr03: 42650866-42664779 Glycine max
Glyma.03G224200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 42654780-42664779 Glycine max
Glyma.03G224200 10.0kb downstream 10.0kb downstream 13914 true Chr03: 42640866-42654779 Glycine max
Glyma.03G224200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 42640866-42650865 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300170 5265 Fabidae View MSA
124063271 5270 Rosid View MSA
123737480 5271 Pentapetalae View MSA
122787094 5272 Eudicot View MSA
122047119 5273 Angiosperm View MSA
121346332 5274 Embryophyte View MSA
123425229 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.11451 0.0 26.3707   High
cufflinks 5.76972 0.0 17.7168    
cufflinks 6.43029 0.0 19.4184    
cufflinks 8.53756 0.0 24.7834   High
cufflinks 5.46109 0.0 16.9081    
cufflinks 5.84662 0.0 17.9462    
cufflinks 4.9628 0.0 15.6123   Low
cufflinks 8.8013 0.0 25.4785   High
cufflinks 7.07399 0.0 21.1204    
cufflinks 0.899       Low
cufflinks 1.18        
cufflinks 1.709       High
cufflinks 1.301        
cufflinks 0.895       Low
cufflinks 1.363        
cufflinks 1.19        
cufflinks 0.765       Low
cufflinks 1.937       High
cufflinks 1.152        
cufflinks 1.49        
cufflinks 1.13        
cufflinks 1.337        
cufflinks 1.409        
cufflinks 1.445        
cufflinks 1.372        
cufflinks 1.096        

0 Strain