Gene : Glyma.19G117200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12266:SF8 - CATION/CALCIUM EXCHANGER 2 Genomic Order:  1172
Name:  ? Glyma.19G117200 Secondary Identifier:  ? PAC:30511195
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G117200 0.5kb upstream 0.5kb upstream 2240 true Chr19: 37342293-37344532 Glycine max
Glyma.19G117200 0.5kb upstream 0.5kb upstream 500 false Chr19: 37344033-37344532 Glycine max
Glyma.19G117200 0.5kb downstream 0.5kb downstream 2240 true Chr19: 37341793-37344032 Glycine max
Glyma.19G117200 0.5kb downstream 0.5kb downstream 500 false Chr19: 37341793-37342292 Glycine max
Glyma.19G117200 1.0kb upstream 1.0kb upstream 2740 true Chr19: 37342293-37345032 Glycine max
Glyma.19G117200 1.0kb upstream 1.0kb upstream 1000 false Chr19: 37344033-37345032 Glycine max
Glyma.19G117200 1.0kb downstream 1.0kb downstream 2740 true Chr19: 37341293-37344032 Glycine max
Glyma.19G117200 1.0kb downstream 1.0kb downstream 1000 false Chr19: 37341293-37342292 Glycine max
Glyma.19G117200 2.0kb upstream 2.0kb upstream 3740 true Chr19: 37342293-37346032 Glycine max
Glyma.19G117200 2.0kb upstream 2.0kb upstream 2000 false Chr19: 37344033-37346032 Glycine max
Glyma.19G117200 2.0kb downstream 2.0kb downstream 3740 true Chr19: 37340293-37344032 Glycine max
Glyma.19G117200 2.0kb downstream 2.0kb downstream 2000 false Chr19: 37340293-37342292 Glycine max
Glyma.19G117200 5.0kb upstream 5.0kb upstream 6740 true Chr19: 37342293-37349032 Glycine max
Glyma.19G117200 5.0kb upstream 5.0kb upstream 5000 false Chr19: 37344033-37349032 Glycine max
Glyma.19G117200 5.0kb downstream 5.0kb downstream 6740 true Chr19: 37337293-37344032 Glycine max
Glyma.19G117200 5.0kb downstream 5.0kb downstream 5000 false Chr19: 37337293-37342292 Glycine max
Glyma.19G117200 10.0kb upstream 10.0kb upstream 11740 true Chr19: 37342293-37354032 Glycine max
Glyma.19G117200 10.0kb upstream 10.0kb upstream 10000 false Chr19: 37344033-37354032 Glycine max
Glyma.19G117200 10.0kb downstream 10.0kb downstream 11740 true Chr19: 37332293-37344032 Glycine max
Glyma.19G117200 10.0kb downstream 10.0kb downstream 10000 false Chr19: 37332293-37342292 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308701 5265 Fabidae View MSA
124069077 5270 Rosid View MSA
123749968 5271 Pentapetalae View MSA
122795914 5272 Eudicot View MSA
122042459 5273 Angiosperm View MSA
121349619 5274 Embryophyte View MSA
123427764 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.940126 0.0 3.37857    
cufflinks 0.773562 0.0 2.81449    
cufflinks 3.72889 0.0 11.4133   High
cufflinks 0.617362 0.0 2.2743    
cufflinks 0.642636 0.0 2.36393    
cufflinks 1.26245 0.0 4.4306    
cufflinks 0.735806 0.0 2.68322    
cufflinks 0.562597 0.0 2.08124    
cufflinks 0.526867 0.0 1.95603    
cufflinks 2.553        
cufflinks 1.277        
cufflinks 5.186       High
cufflinks 0.825        
cufflinks 0.227       Low
cufflinks 1.21        
cufflinks 1.603        
cufflinks 2.692        
cufflinks 3.732       High
cufflinks 1.014        
cufflinks 1.416        
cufflinks 0.294       Low
cufflinks 2.029        
cufflinks 1.43        
cufflinks 1.072        
cufflinks 1.843        
cufflinks 0.987        

0 Strain