Gene : Glyma.19G117700 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11618:SF4 - TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT Genomic Order:  1177
Name:  ? Glyma.19G117700 Secondary Identifier:  ? PAC:30512490
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G117700 0.5kb upstream 0.5kb upstream 15244 true Chr19: 37396902-37412145 Glycine max
Glyma.19G117700 0.5kb upstream 0.5kb upstream 500 false Chr19: 37396902-37397401 Glycine max
Glyma.19G117700 0.5kb downstream 0.5kb downstream 15244 true Chr19: 37397402-37412645 Glycine max
Glyma.19G117700 0.5kb downstream 0.5kb downstream 500 false Chr19: 37412146-37412645 Glycine max
Glyma.19G117700 1.0kb upstream 1.0kb upstream 15744 true Chr19: 37396402-37412145 Glycine max
Glyma.19G117700 1.0kb upstream 1.0kb upstream 1000 false Chr19: 37396402-37397401 Glycine max
Glyma.19G117700 1.0kb downstream 1.0kb downstream 15744 true Chr19: 37397402-37413145 Glycine max
Glyma.19G117700 1.0kb downstream 1.0kb downstream 1000 false Chr19: 37412146-37413145 Glycine max
Glyma.19G117700 2.0kb upstream 2.0kb upstream 16744 true Chr19: 37395402-37412145 Glycine max
Glyma.19G117700 2.0kb upstream 2.0kb upstream 2000 false Chr19: 37395402-37397401 Glycine max
Glyma.19G117700 2.0kb downstream 2.0kb downstream 16744 true Chr19: 37397402-37414145 Glycine max
Glyma.19G117700 2.0kb downstream 2.0kb downstream 2000 false Chr19: 37412146-37414145 Glycine max
Glyma.19G117700 5.0kb upstream 5.0kb upstream 19744 true Chr19: 37392402-37412145 Glycine max
Glyma.19G117700 5.0kb upstream 5.0kb upstream 5000 false Chr19: 37392402-37397401 Glycine max
Glyma.19G117700 5.0kb downstream 5.0kb downstream 19744 true Chr19: 37397402-37417145 Glycine max
Glyma.19G117700 5.0kb downstream 5.0kb downstream 5000 false Chr19: 37412146-37417145 Glycine max
Glyma.19G117700 10.0kb upstream 10.0kb upstream 24744 true Chr19: 37387402-37412145 Glycine max
Glyma.19G117700 10.0kb upstream 10.0kb upstream 10000 false Chr19: 37387402-37397401 Glycine max
Glyma.19G117700 10.0kb downstream 10.0kb downstream 24744 true Chr19: 37397402-37422145 Glycine max
Glyma.19G117700 10.0kb downstream 10.0kb downstream 10000 false Chr19: 37412146-37422145 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311198 5265 Fabidae View MSA
124069197 5270 Rosid View MSA
123746124 5271 Pentapetalae View MSA
122796668 5272 Eudicot View MSA
122049145 5273 Angiosperm View MSA
121351360 5274 Embryophyte View MSA
123427604 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.79743 0.0 15.63    
cufflinks 4.1826 0.0 14.0532    
cufflinks 5.1169 0.0 18.9349    
cufflinks 3.1862 0.0 11.4436   Low
cufflinks 5.76626 0.0 18.1861   High
cufflinks 4.22254 0.0 16.5358    
cufflinks 4.29904 0.0 16.6996    
cufflinks 3.93634 0.0 13.4618    
cufflinks 3.75394 0.0 15.1918    
cufflinks 0.242        
cufflinks 0.238        
cufflinks 0.272        
cufflinks 0.389       High
cufflinks 0.415       High
cufflinks 0.286        
cufflinks 0.303        
cufflinks 0.174       Low
cufflinks 0.322        
cufflinks 0.363       High
cufflinks 0.283        
cufflinks 0.232        
cufflinks 0.307        
cufflinks 0.321        
cufflinks 0.304        
cufflinks 0.279        
cufflinks 0.212       Low

0 Strain