Gene : Glyma.03G233500 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR13832:SF198 - PROTEIN PHOSPHATASE 2C 34-RELATED Genomic Order:  2335
Name:  ? Glyma.03G233500 Secondary Identifier:  ? PAC:30518603
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G233500 0.5kb upstream 0.5kb upstream 4800 true Chr03: 43430628-43435427 Glycine max
Glyma.03G233500 0.5kb upstream 0.5kb upstream 500 false Chr03: 43434928-43435427 Glycine max
Glyma.03G233500 0.5kb downstream 0.5kb downstream 4800 true Chr03: 43430128-43434927 Glycine max
Glyma.03G233500 0.5kb downstream 0.5kb downstream 500 false Chr03: 43430128-43430627 Glycine max
Glyma.03G233500 1.0kb upstream 1.0kb upstream 5300 true Chr03: 43430628-43435927 Glycine max
Glyma.03G233500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 43434928-43435927 Glycine max
Glyma.03G233500 1.0kb downstream 1.0kb downstream 5300 true Chr03: 43429628-43434927 Glycine max
Glyma.03G233500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 43429628-43430627 Glycine max
Glyma.03G233500 2.0kb upstream 2.0kb upstream 6300 true Chr03: 43430628-43436927 Glycine max
Glyma.03G233500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 43434928-43436927 Glycine max
Glyma.03G233500 2.0kb downstream 2.0kb downstream 6300 true Chr03: 43428628-43434927 Glycine max
Glyma.03G233500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 43428628-43430627 Glycine max
Glyma.03G233500 5.0kb upstream 5.0kb upstream 9300 true Chr03: 43430628-43439927 Glycine max
Glyma.03G233500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 43434928-43439927 Glycine max
Glyma.03G233500 5.0kb downstream 5.0kb downstream 9300 true Chr03: 43425628-43434927 Glycine max
Glyma.03G233500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 43425628-43430627 Glycine max
Glyma.03G233500 10.0kb upstream 10.0kb upstream 14300 true Chr03: 43430628-43444927 Glycine max
Glyma.03G233500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 43434928-43444927 Glycine max
Glyma.03G233500 10.0kb downstream 10.0kb downstream 14300 true Chr03: 43420628-43434927 Glycine max
Glyma.03G233500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 43420628-43430627 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309783 5265 Fabidae View MSA
124065927 5270 Rosid View MSA
123753048 5271 Pentapetalae View MSA
122797893 5272 Eudicot View MSA
122041990 5273 Angiosperm View MSA
121309911 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.30553 0.0 26.0413    
cufflinks 4.81303 0.0 16.0748   Low
cufflinks 6.75823 0.0 24.2564    
cufflinks 7.54665 0.0 26.849    
cufflinks 9.78658 0.0 39.1811    
cufflinks 22.8016 0.0 89.2716   High
cufflinks 9.23399 0.0 31.9658    
cufflinks 12.2766 0.0 48.6079    
cufflinks 6.68668 0.0 24.3985    
cufflinks 1.944       High
cufflinks 1.62        
cufflinks 1.701       High
cufflinks 1.513        
cufflinks 1.067        
cufflinks 0.667       Low
cufflinks 0.472       Low
cufflinks 1.509        
cufflinks 1.512        
cufflinks 0.945        
cufflinks 1.075        
cufflinks 1.286        
cufflinks 0.76        
cufflinks 0.67       Low
cufflinks 1.302        
cufflinks 0.512       Low
cufflinks 1.095        

0 Strain