Gene : Glyma.03G232900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10071//PTHR10071:SF178 - TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR Genomic Order:  2329
Name:  ? Glyma.03G232900 Secondary Identifier:  ? PAC:30516786
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G232900 0.5kb upstream 0.5kb upstream 1445 true Chr03: 43379870-43381314 Glycine max
Glyma.03G232900 0.5kb upstream 0.5kb upstream 500 false Chr03: 43379870-43380369 Glycine max
Glyma.03G232900 0.5kb downstream 0.5kb downstream 1445 true Chr03: 43380370-43381814 Glycine max
Glyma.03G232900 0.5kb downstream 0.5kb downstream 500 false Chr03: 43381315-43381814 Glycine max
Glyma.03G232900 1.0kb upstream 1.0kb upstream 1945 true Chr03: 43379370-43381314 Glycine max
Glyma.03G232900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 43379370-43380369 Glycine max
Glyma.03G232900 1.0kb downstream 1.0kb downstream 1945 true Chr03: 43380370-43382314 Glycine max
Glyma.03G232900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 43381315-43382314 Glycine max
Glyma.03G232900 2.0kb upstream 2.0kb upstream 2945 true Chr03: 43378370-43381314 Glycine max
Glyma.03G232900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 43378370-43380369 Glycine max
Glyma.03G232900 2.0kb downstream 2.0kb downstream 2945 true Chr03: 43380370-43383314 Glycine max
Glyma.03G232900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 43381315-43383314 Glycine max
Glyma.03G232900 5.0kb upstream 5.0kb upstream 5945 true Chr03: 43375370-43381314 Glycine max
Glyma.03G232900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 43375370-43380369 Glycine max
Glyma.03G232900 5.0kb downstream 5.0kb downstream 5945 true Chr03: 43380370-43386314 Glycine max
Glyma.03G232900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 43381315-43386314 Glycine max
Glyma.03G232900 10.0kb upstream 10.0kb upstream 10945 true Chr03: 43370370-43381314 Glycine max
Glyma.03G232900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 43370370-43380369 Glycine max
Glyma.03G232900 10.0kb downstream 10.0kb downstream 10945 true Chr03: 43380370-43391314 Glycine max
Glyma.03G232900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 43381315-43391314 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122245470 5265 Fabidae Singleton cluster - no MSA
124071529 5270 Rosid View MSA
123749447 5271 Pentapetalae View MSA
122796147 5272 Eudicot View MSA
122045626 5273 Angiosperm View MSA
121350500 5274 Embryophyte View MSA
123428177 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.21885 0.0 4.50259    
cufflinks 0.381857 0.0 1.48756    
cufflinks 2.51921 0.0 8.87894    
cufflinks 1.3992 0.0 5.12876    
cufflinks 0.0984831 0.0 0.404686 Low Low
cufflinks 0.110969 0.0 0.453702 Low Low
cufflinks 4.89703 0.0 16.0   High
cufflinks 1.03999 0.0 3.87411    
cufflinks 0.266559 0.0 1.05159    
cufflinks 0.729       High
cufflinks 0.121        
cufflinks 1.435       High
cufflinks 0.053     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.114        
cufflinks 0.461        
cufflinks 0.049     Low Low
cufflinks 0.205        
cufflinks 0.709       High
cufflinks 0.42        
cufflinks 0.104        
cufflinks 0.397        
cufflinks 0.164        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.37        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain