Gene : Glyma.19G154400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11088:SF30 - ADENYLATE ISOPENTENYLTRANSFERASE 3, CHLOROPLASTIC Genomic Order:  1544
Name:  ? Glyma.19G154400 Secondary Identifier:  ? PAC:30514851
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-2681 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G154400 0.5kb upstream 0.5kb upstream 1433 true Chr19: 41471430-41472862 Glycine max
Glyma.19G154400 0.5kb upstream 0.5kb upstream 500 false Chr19: 41472363-41472862 Glycine max
Glyma.19G154400 0.5kb downstream 0.5kb downstream 1433 true Chr19: 41470930-41472362 Glycine max
Glyma.19G154400 0.5kb downstream 0.5kb downstream 500 false Chr19: 41470930-41471429 Glycine max
Glyma.19G154400 1.0kb upstream 1.0kb upstream 1933 true Chr19: 41471430-41473362 Glycine max
Glyma.19G154400 1.0kb upstream 1.0kb upstream 1000 false Chr19: 41472363-41473362 Glycine max
Glyma.19G154400 1.0kb downstream 1.0kb downstream 1933 true Chr19: 41470430-41472362 Glycine max
Glyma.19G154400 1.0kb downstream 1.0kb downstream 1000 false Chr19: 41470430-41471429 Glycine max
Glyma.19G154400 2.0kb upstream 2.0kb upstream 2933 true Chr19: 41471430-41474362 Glycine max
Glyma.19G154400 2.0kb upstream 2.0kb upstream 2000 false Chr19: 41472363-41474362 Glycine max
Glyma.19G154400 2.0kb downstream 2.0kb downstream 2933 true Chr19: 41469430-41472362 Glycine max
Glyma.19G154400 2.0kb downstream 2.0kb downstream 2000 false Chr19: 41469430-41471429 Glycine max
Glyma.19G154400 5.0kb upstream 5.0kb upstream 5933 true Chr19: 41471430-41477362 Glycine max
Glyma.19G154400 5.0kb upstream 5.0kb upstream 5000 false Chr19: 41472363-41477362 Glycine max
Glyma.19G154400 5.0kb downstream 5.0kb downstream 5933 true Chr19: 41466430-41472362 Glycine max
Glyma.19G154400 5.0kb downstream 5.0kb downstream 5000 false Chr19: 41466430-41471429 Glycine max
Glyma.19G154400 10.0kb upstream 10.0kb upstream 10933 true Chr19: 41471430-41482362 Glycine max
Glyma.19G154400 10.0kb upstream 10.0kb upstream 10000 false Chr19: 41472363-41482362 Glycine max
Glyma.19G154400 10.0kb downstream 10.0kb downstream 10933 true Chr19: 41461430-41472362 Glycine max
Glyma.19G154400 10.0kb downstream 10.0kb downstream 10000 false Chr19: 41461430-41471429 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253878 5265 Fabidae View MSA
124062328 5270 Rosid View MSA
123742235 5271 Pentapetalae View MSA
122793817 5272 Eudicot View MSA
122042275 5273 Angiosperm View MSA
121309945 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.54619 0.0 5.54061   High
cufflinks 0.0230679 0.0 0.104613 Low  
cufflinks 0.178749 0.0 0.709391 Low  
cufflinks 0.0124284 0.0 0.059756 Low Low
cufflinks 0.0921285 0.0 0.374259 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0225023 0.0 0.101844 Low  
cufflinks 0.0452359 0.0 0.192789 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.487       High
cufflinks 0.088     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.167        
cufflinks 0.049     Low Low
cufflinks 0.077     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.227        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain