Gene : Glyma.19G154500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10367:SF0 - MRNA-CAPPING ENZYME Genomic Order:  1545
Name:  ? Glyma.19G154500 Secondary Identifier:  ? PAC:30514181
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G154500 0.5kb upstream 0.5kb upstream 15648 true Chr19: 41476782-41492429 Glycine max
Glyma.19G154500 0.5kb upstream 0.5kb upstream 500 false Chr19: 41491930-41492429 Glycine max
Glyma.19G154500 0.5kb downstream 0.5kb downstream 15648 true Chr19: 41476282-41491929 Glycine max
Glyma.19G154500 0.5kb downstream 0.5kb downstream 500 false Chr19: 41476282-41476781 Glycine max
Glyma.19G154500 1.0kb upstream 1.0kb upstream 16148 true Chr19: 41476782-41492929 Glycine max
Glyma.19G154500 1.0kb upstream 1.0kb upstream 1000 false Chr19: 41491930-41492929 Glycine max
Glyma.19G154500 1.0kb downstream 1.0kb downstream 16148 true Chr19: 41475782-41491929 Glycine max
Glyma.19G154500 1.0kb downstream 1.0kb downstream 1000 false Chr19: 41475782-41476781 Glycine max
Glyma.19G154500 2.0kb upstream 2.0kb upstream 17148 true Chr19: 41476782-41493929 Glycine max
Glyma.19G154500 2.0kb upstream 2.0kb upstream 2000 false Chr19: 41491930-41493929 Glycine max
Glyma.19G154500 2.0kb downstream 2.0kb downstream 17148 true Chr19: 41474782-41491929 Glycine max
Glyma.19G154500 2.0kb downstream 2.0kb downstream 2000 false Chr19: 41474782-41476781 Glycine max
Glyma.19G154500 5.0kb upstream 5.0kb upstream 20148 true Chr19: 41476782-41496929 Glycine max
Glyma.19G154500 5.0kb upstream 5.0kb upstream 5000 false Chr19: 41491930-41496929 Glycine max
Glyma.19G154500 5.0kb downstream 5.0kb downstream 20148 true Chr19: 41471782-41491929 Glycine max
Glyma.19G154500 5.0kb downstream 5.0kb downstream 5000 false Chr19: 41471782-41476781 Glycine max
Glyma.19G154500 10.0kb upstream 10.0kb upstream 25148 true Chr19: 41476782-41501929 Glycine max
Glyma.19G154500 10.0kb upstream 10.0kb upstream 10000 false Chr19: 41491930-41501929 Glycine max
Glyma.19G154500 10.0kb downstream 10.0kb downstream 25148 true Chr19: 41466782-41491929 Glycine max
Glyma.19G154500 10.0kb downstream 10.0kb downstream 10000 false Chr19: 41466782-41476781 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304249 5265 Fabidae View MSA
124065683 5270 Rosid View MSA
123738577 5271 Pentapetalae View MSA
122791421 5272 Eudicot View MSA
122046582 5273 Angiosperm View MSA
121350766 5274 Embryophyte View MSA
123427499 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.41222 0.0 15.0321   High
cufflinks 2.24752 0.0 6.95947   Low
cufflinks 4.49937 0.0 12.6657   High
cufflinks 2.87854 0.0 8.59092    
cufflinks 3.66899 0.0 10.6481    
cufflinks 4.27268 0.0 12.1598    
cufflinks 2.45824 0.0 7.53061    
cufflinks 2.90685 0.0 8.67576    
cufflinks 2.44987 0.0 7.50129    
cufflinks 0.591       Low
cufflinks 1.368       High
cufflinks 0.722        
cufflinks 0.818        
cufflinks 0.809        
cufflinks 0.919        
cufflinks 0.904        
cufflinks 0.522       Low
cufflinks 0.654        
cufflinks 0.584       Low
cufflinks 0.977        
cufflinks 1.23       High
cufflinks 1.032        
cufflinks 0.763        
cufflinks 1.148       High
cufflinks 0.961        
cufflinks 0.827        

0 Strain