Gene : Glyma.04G071500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11937:SF47 - ACTIN-RELATED PROTEIN 6 Genomic Order:  715
Name:  ? Glyma.04G071500 Secondary Identifier:  ? PAC:30487513
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G071500 0.5kb upstream 0.5kb upstream 6488 true Chr04: 5949695-5956182 Glycine max
Glyma.04G071500 0.5kb upstream 0.5kb upstream 500 false Chr04: 5955683-5956182 Glycine max
Glyma.04G071500 0.5kb downstream 0.5kb downstream 6488 true Chr04: 5949195-5955682 Glycine max
Glyma.04G071500 0.5kb downstream 0.5kb downstream 500 false Chr04: 5949195-5949694 Glycine max
Glyma.04G071500 1.0kb upstream 1.0kb upstream 6988 true Chr04: 5949695-5956682 Glycine max
Glyma.04G071500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 5955683-5956682 Glycine max
Glyma.04G071500 1.0kb downstream 1.0kb downstream 6988 true Chr04: 5948695-5955682 Glycine max
Glyma.04G071500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 5948695-5949694 Glycine max
Glyma.04G071500 2.0kb upstream 2.0kb upstream 7988 true Chr04: 5949695-5957682 Glycine max
Glyma.04G071500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 5955683-5957682 Glycine max
Glyma.04G071500 2.0kb downstream 2.0kb downstream 7988 true Chr04: 5947695-5955682 Glycine max
Glyma.04G071500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 5947695-5949694 Glycine max
Glyma.04G071500 5.0kb upstream 5.0kb upstream 10988 true Chr04: 5949695-5960682 Glycine max
Glyma.04G071500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 5955683-5960682 Glycine max
Glyma.04G071500 5.0kb downstream 5.0kb downstream 10988 true Chr04: 5944695-5955682 Glycine max
Glyma.04G071500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 5944695-5949694 Glycine max
Glyma.04G071500 10.0kb upstream 10.0kb upstream 15988 true Chr04: 5949695-5965682 Glycine max
Glyma.04G071500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 5955683-5965682 Glycine max
Glyma.04G071500 10.0kb downstream 10.0kb downstream 15988 true Chr04: 5939695-5955682 Glycine max
Glyma.04G071500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 5939695-5949694 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304576 5265 Fabidae View MSA
124066979 5270 Rosid View MSA
123737944 5271 Pentapetalae View MSA
122790608 5272 Eudicot View MSA
122044140 5273 Angiosperm View MSA
121346447 5274 Embryophyte View MSA
123426256 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.9917 0.0 32.1799   High
cufflinks 9.13991 0.0 24.8781    
cufflinks 14.0538 0.0 37.5823   High
cufflinks 8.48795 0.0 23.2175    
cufflinks 7.30045 0.0 20.117    
cufflinks 5.62642 0.0 15.9178   Low
cufflinks 7.20429 0.0 19.921    
cufflinks 7.81259 0.0 21.4704    
cufflinks 8.13729 0.0 22.2804    
cufflinks 1.259       Low
cufflinks 2.081        
cufflinks 2.619        
cufflinks 1.39       Low
cufflinks 1.309       Low
cufflinks 2.066        
cufflinks 2.652        
cufflinks 1.36       Low
cufflinks 2.022        
cufflinks 2.559        
cufflinks 3.44       High
cufflinks 1.746        
cufflinks 3.074       High
cufflinks 2.277        
cufflinks 2.226        
cufflinks 2.863       High
cufflinks 1.623        

0 Strain