Gene : Glyma.04G076300 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR10961 - PEROXISOMAL SARCOSINE OXIDASE Genomic Order:  763
Name:  ? Glyma.04G076300 Secondary Identifier:  ? PAC:30487987
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G076300 0.5kb upstream 0.5kb upstream 2189 true Chr04: 6396617-6398805 Glycine max
Glyma.04G076300 0.5kb upstream 0.5kb upstream 500 false Chr04: 6398306-6398805 Glycine max
Glyma.04G076300 0.5kb downstream 0.5kb downstream 2189 true Chr04: 6396117-6398305 Glycine max
Glyma.04G076300 0.5kb downstream 0.5kb downstream 500 false Chr04: 6396117-6396616 Glycine max
Glyma.04G076300 1.0kb upstream 1.0kb upstream 2689 true Chr04: 6396617-6399305 Glycine max
Glyma.04G076300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 6398306-6399305 Glycine max
Glyma.04G076300 1.0kb downstream 1.0kb downstream 2689 true Chr04: 6395617-6398305 Glycine max
Glyma.04G076300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 6395617-6396616 Glycine max
Glyma.04G076300 2.0kb upstream 2.0kb upstream 3689 true Chr04: 6396617-6400305 Glycine max
Glyma.04G076300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 6398306-6400305 Glycine max
Glyma.04G076300 2.0kb downstream 2.0kb downstream 3689 true Chr04: 6394617-6398305 Glycine max
Glyma.04G076300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 6394617-6396616 Glycine max
Glyma.04G076300 5.0kb upstream 5.0kb upstream 6689 true Chr04: 6396617-6403305 Glycine max
Glyma.04G076300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 6398306-6403305 Glycine max
Glyma.04G076300 5.0kb downstream 5.0kb downstream 6689 true Chr04: 6391617-6398305 Glycine max
Glyma.04G076300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 6391617-6396616 Glycine max
Glyma.04G076300 10.0kb upstream 10.0kb upstream 11689 true Chr04: 6396617-6408305 Glycine max
Glyma.04G076300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 6398306-6408305 Glycine max
Glyma.04G076300 10.0kb downstream 10.0kb downstream 11689 true Chr04: 6386617-6398305 Glycine max
Glyma.04G076300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 6386617-6396616 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301147 5265 Fabidae View MSA
124067197 5270 Rosid View MSA
123745961 5271 Pentapetalae View MSA
122793788 5272 Eudicot View MSA
122051106 5273 Angiosperm View MSA
121351535 5274 Embryophyte View MSA
123427900 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.1016 0.0 43.0037    
cufflinks 1.82866 0.0 6.15277   Low
cufflinks 11.6079 0.0 31.4292    
cufflinks 20.4495 0.0 54.5667 High  
cufflinks 42.7937 0.0 118.943 High High
cufflinks 15.1244 0.0 40.438    
cufflinks 20.8656 0.0 55.7272    
cufflinks 7.29173 0.0 20.4083    
cufflinks 40.2991 0.0 110.891 High High
cufflinks 15.527     High  
cufflinks 4.935        
cufflinks 9.12     High  
cufflinks 26.412     High High
cufflinks 28.646     High High
cufflinks 28.396     High High
cufflinks 7.253     High  
cufflinks 5.869        
cufflinks 9.056     High  
cufflinks 5.201        
cufflinks 5.268        
cufflinks 14.286     High  
cufflinks 2.966       Low
cufflinks 2.38       Low
cufflinks 7.657     High  
cufflinks 4.978        
cufflinks 9.128     High  

0 Strain