Gene : Glyma.04G078700 G. max Wm82.a2.v1
Defline:  (1 of 4) 2.1.1.33 - tRNA (guanine(46)-N(7))-methyltransferase / tRNA guanine 7-methyltransferase Genomic Order:  787
Name:  ? Glyma.04G078700 Secondary Identifier:  ? PAC:30489877
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G078700 0.5kb upstream 0.5kb upstream 3238 true Chr04: 6608179-6611416 Glycine max
Glyma.04G078700 0.5kb upstream 0.5kb upstream 500 false Chr04: 6608179-6608678 Glycine max
Glyma.04G078700 0.5kb downstream 0.5kb downstream 3238 true Chr04: 6608679-6611916 Glycine max
Glyma.04G078700 0.5kb downstream 0.5kb downstream 500 false Chr04: 6611417-6611916 Glycine max
Glyma.04G078700 1.0kb upstream 1.0kb upstream 3738 true Chr04: 6607679-6611416 Glycine max
Glyma.04G078700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 6607679-6608678 Glycine max
Glyma.04G078700 1.0kb downstream 1.0kb downstream 3738 true Chr04: 6608679-6612416 Glycine max
Glyma.04G078700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 6611417-6612416 Glycine max
Glyma.04G078700 2.0kb upstream 2.0kb upstream 4738 true Chr04: 6606679-6611416 Glycine max
Glyma.04G078700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 6606679-6608678 Glycine max
Glyma.04G078700 2.0kb downstream 2.0kb downstream 4738 true Chr04: 6608679-6613416 Glycine max
Glyma.04G078700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 6611417-6613416 Glycine max
Glyma.04G078700 5.0kb upstream 5.0kb upstream 7738 true Chr04: 6603679-6611416 Glycine max
Glyma.04G078700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 6603679-6608678 Glycine max
Glyma.04G078700 5.0kb downstream 5.0kb downstream 7738 true Chr04: 6608679-6616416 Glycine max
Glyma.04G078700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 6611417-6616416 Glycine max
Glyma.04G078700 10.0kb upstream 10.0kb upstream 12738 true Chr04: 6598679-6611416 Glycine max
Glyma.04G078700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 6598679-6608678 Glycine max
Glyma.04G078700 10.0kb downstream 10.0kb downstream 12738 true Chr04: 6608679-6621416 Glycine max
Glyma.04G078700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 6611417-6621416 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301643 5265 Fabidae View MSA
124061817 5270 Rosid View MSA
123742667 5271 Pentapetalae View MSA
122790265 5272 Eudicot View MSA
122041903 5273 Angiosperm View MSA
121344094 5274 Embryophyte View MSA
123425098 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.3141 0.0 29.0198    
cufflinks 12.8281 0.0 35.3013    
cufflinks 7.28283 0.0 21.2301   Low
cufflinks 9.69049 0.0 27.3569    
cufflinks 11.6068 0.0 32.253    
cufflinks 13.0739 0.0 35.9738   High
cufflinks 10.1642 0.0 28.6785    
cufflinks 12.608 0.0 34.6991    
cufflinks 10.8566 0.0 30.2918    
cufflinks 3.534        
cufflinks 2.669        
cufflinks 4.244        
cufflinks 6.476       High
cufflinks 9.573     High High
cufflinks 2.553        
cufflinks 3.217        
cufflinks 2.392        
cufflinks 4.045        
cufflinks 5.575       High
cufflinks 2.114       Low
cufflinks 2.566        
cufflinks 2.304        
cufflinks 2.745        
cufflinks 3.163        
cufflinks 2.605        
cufflinks 2.892        

0 Strain