Gene : Glyma.04G079600 G. max Wm82.a2.v1
Defline:  (1 of 11) PTHR31236:SF2 - DEHYDRATION-RESPONSIVE PROTEIN RD22 Genomic Order:  796
Name:  ? Glyma.04G079600 Secondary Identifier:  ? PAC:30487217
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G079600 0.5kb upstream 0.5kb upstream 4549 true Chr04: 6654150-6658698 Glycine max
Glyma.04G079600 0.5kb upstream 0.5kb upstream 500 false Chr04: 6658199-6658698 Glycine max
Glyma.04G079600 0.5kb downstream 0.5kb downstream 4549 true Chr04: 6653650-6658198 Glycine max
Glyma.04G079600 0.5kb downstream 0.5kb downstream 500 false Chr04: 6653650-6654149 Glycine max
Glyma.04G079600 1.0kb upstream 1.0kb upstream 5049 true Chr04: 6654150-6659198 Glycine max
Glyma.04G079600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 6658199-6659198 Glycine max
Glyma.04G079600 1.0kb downstream 1.0kb downstream 5049 true Chr04: 6653150-6658198 Glycine max
Glyma.04G079600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 6653150-6654149 Glycine max
Glyma.04G079600 2.0kb upstream 2.0kb upstream 6049 true Chr04: 6654150-6660198 Glycine max
Glyma.04G079600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 6658199-6660198 Glycine max
Glyma.04G079600 2.0kb downstream 2.0kb downstream 6049 true Chr04: 6652150-6658198 Glycine max
Glyma.04G079600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 6652150-6654149 Glycine max
Glyma.04G079600 5.0kb upstream 5.0kb upstream 9049 true Chr04: 6654150-6663198 Glycine max
Glyma.04G079600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 6658199-6663198 Glycine max
Glyma.04G079600 5.0kb downstream 5.0kb downstream 9049 true Chr04: 6649150-6658198 Glycine max
Glyma.04G079600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 6649150-6654149 Glycine max
Glyma.04G079600 10.0kb upstream 10.0kb upstream 14049 true Chr04: 6654150-6668198 Glycine max
Glyma.04G079600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 6658199-6668198 Glycine max
Glyma.04G079600 10.0kb downstream 10.0kb downstream 14049 true Chr04: 6644150-6658198 Glycine max
Glyma.04G079600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 6644150-6654149 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303459 5265 Fabidae View MSA
124074316 5270 Rosid View MSA
123753290 5271 Pentapetalae View MSA
122797673 5272 Eudicot View MSA
122050943 5273 Angiosperm View MSA
121351029 5274 Embryophyte View MSA
123381981 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.6233 0.0 122.802 High  
cufflinks 31.605 0.0 85.0399 High  
cufflinks 161.468 0.0 541.007 High  
cufflinks 320.343 0.0 1287.21 High  
cufflinks 56.8592 0.0 160.3 High  
cufflinks 12.5132 0.0 33.8202    
cufflinks 0.459879 0.0 1.71882   Low
cufflinks 463.987 0.0 2124.46 High High
cufflinks 39.8968 0.0 108.895 High  
cufflinks 6.419        
cufflinks 2.042        
cufflinks 39.642     High High
cufflinks 0.008     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.562        
cufflinks 3.76        
cufflinks 29.404     High  
cufflinks 44.275     High High
cufflinks 27.581     High  
cufflinks 2.108        
cufflinks 14.063     High  
cufflinks 3.688        
cufflinks 4.547        
cufflinks 5.779        
cufflinks 3.996        
cufflinks 9.362     High  

0 Strain