Gene : Glyma.04G078300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22952//PTHR22952:SF113 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED Genomic Order:  783
Name:  ? Glyma.04G078300 Secondary Identifier:  ? PAC:30491301
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G078300 0.5kb upstream 0.5kb upstream 6318 true Chr04: 6554081-6560398 Glycine max
Glyma.04G078300 0.5kb upstream 0.5kb upstream 500 false Chr04: 6554081-6554580 Glycine max
Glyma.04G078300 0.5kb downstream 0.5kb downstream 6318 true Chr04: 6554581-6560898 Glycine max
Glyma.04G078300 0.5kb downstream 0.5kb downstream 500 false Chr04: 6560399-6560898 Glycine max
Glyma.04G078300 1.0kb upstream 1.0kb upstream 6818 true Chr04: 6553581-6560398 Glycine max
Glyma.04G078300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 6553581-6554580 Glycine max
Glyma.04G078300 1.0kb downstream 1.0kb downstream 6818 true Chr04: 6554581-6561398 Glycine max
Glyma.04G078300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 6560399-6561398 Glycine max
Glyma.04G078300 2.0kb upstream 2.0kb upstream 7818 true Chr04: 6552581-6560398 Glycine max
Glyma.04G078300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 6552581-6554580 Glycine max
Glyma.04G078300 2.0kb downstream 2.0kb downstream 7818 true Chr04: 6554581-6562398 Glycine max
Glyma.04G078300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 6560399-6562398 Glycine max
Glyma.04G078300 5.0kb upstream 5.0kb upstream 10818 true Chr04: 6549581-6560398 Glycine max
Glyma.04G078300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 6549581-6554580 Glycine max
Glyma.04G078300 5.0kb downstream 5.0kb downstream 10818 true Chr04: 6554581-6565398 Glycine max
Glyma.04G078300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 6560399-6565398 Glycine max
Glyma.04G078300 10.0kb upstream 10.0kb upstream 15818 true Chr04: 6544581-6560398 Glycine max
Glyma.04G078300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 6544581-6554580 Glycine max
Glyma.04G078300 10.0kb downstream 10.0kb downstream 15818 true Chr04: 6554581-6570398 Glycine max
Glyma.04G078300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 6560399-6570398 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029163 5273 Angiosperm View MSA
122312182 5265 Fabidae View MSA
124062967 5270 Rosid View MSA
123747732 5271 Pentapetalae View MSA
122794989 5272 Eudicot View MSA
123428913 5275 Viridiplantae View MSA
121298544 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.55466 0.0 58.2229    
cufflinks 11.6502 0.0 68.4312    
cufflinks 6.1255 0.0 42.8163    
cufflinks 15.6026 0.0 93.3117    
cufflinks 26.0979 0.0 108.778 High  
cufflinks 3.9542 0.0 19.7448   Low
cufflinks 4.79895 0.0 26.6774   Low
cufflinks 34.2681 0.0 180.695 High High
cufflinks 50.4262 0.0 279.563 High High
cufflinks 0.386        
cufflinks 1.9       High
cufflinks 0.559        
cufflinks 0.552        
cufflinks 0.38        
cufflinks 3.597       High
cufflinks 0.302        
cufflinks 0.611        
cufflinks 0.769        
cufflinks 0.465        
cufflinks 0.294        
cufflinks 1.268        
cufflinks 0.307        
cufflinks 0.156       Low
cufflinks 1.522       High
cufflinks 0.252       Low
cufflinks 0.837        

0 Strain