Gene : Glyma.04G039700 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING Genomic Order:  397
Name:  ? Glyma.04G039700 Secondary Identifier:  ? PAC:30489388
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G039700 0.5kb upstream 0.5kb upstream 7299 true Chr04: 3169297-3176595 Glycine max
Glyma.04G039700 0.5kb upstream 0.5kb upstream 500 false Chr04: 3176096-3176595 Glycine max
Glyma.04G039700 0.5kb downstream 0.5kb downstream 7299 true Chr04: 3168797-3176095 Glycine max
Glyma.04G039700 0.5kb downstream 0.5kb downstream 500 false Chr04: 3168797-3169296 Glycine max
Glyma.04G039700 1.0kb upstream 1.0kb upstream 7799 true Chr04: 3169297-3177095 Glycine max
Glyma.04G039700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3176096-3177095 Glycine max
Glyma.04G039700 1.0kb downstream 1.0kb downstream 7799 true Chr04: 3168297-3176095 Glycine max
Glyma.04G039700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3168297-3169296 Glycine max
Glyma.04G039700 2.0kb upstream 2.0kb upstream 8799 true Chr04: 3169297-3178095 Glycine max
Glyma.04G039700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3176096-3178095 Glycine max
Glyma.04G039700 2.0kb downstream 2.0kb downstream 8799 true Chr04: 3167297-3176095 Glycine max
Glyma.04G039700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3167297-3169296 Glycine max
Glyma.04G039700 5.0kb upstream 5.0kb upstream 11799 true Chr04: 3169297-3181095 Glycine max
Glyma.04G039700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3176096-3181095 Glycine max
Glyma.04G039700 5.0kb downstream 5.0kb downstream 11799 true Chr04: 3164297-3176095 Glycine max
Glyma.04G039700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3164297-3169296 Glycine max
Glyma.04G039700 10.0kb upstream 10.0kb upstream 16799 true Chr04: 3169297-3186095 Glycine max
Glyma.04G039700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3176096-3186095 Glycine max
Glyma.04G039700 10.0kb downstream 10.0kb downstream 16799 true Chr04: 3159297-3176095 Glycine max
Glyma.04G039700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3159297-3169296 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304615 5265 Fabidae View MSA
124061889 5270 Rosid View MSA
123751364 5271 Pentapetalae View MSA
122793070 5272 Eudicot View MSA
122041627 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351500 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.15529 0.0 19.3798    
cufflinks 13.227 0.0 35.2983    
cufflinks 11.3576 0.0 30.305    
cufflinks 10.7508 0.0 28.7034    
cufflinks 8.94615 0.0 23.9919    
cufflinks 7.51385 0.0 20.29    
cufflinks 35.6493 0.0 100.983 High High
cufflinks 7.6439 0.0 20.6148    
cufflinks 8.29849 0.0 22.3088    
cufflinks 2.536        
cufflinks 4.322        
cufflinks 3.225        
cufflinks 2.262       Low
cufflinks 2.403       Low
cufflinks 5.14       High
cufflinks 4.138        
cufflinks 1.866       Low
cufflinks 3.935        
cufflinks 3.347        
cufflinks 5.743       High
cufflinks 3.695        
cufflinks 4.938       High
cufflinks 2.719        
cufflinks 3.808        
cufflinks 4.9       High
cufflinks 2.713        

0 Strain