Gene : Glyma.04G042500 G. max Wm82.a2.v1
Defline:  (1 of 7) PF00069//PF00954//PF01453//PF08276 - Protein kinase domain (Pkinase) // S-locus glycoprotein domain (S_locus_glycop) // D-mannose binding lectin (B_lectin) // PAN-like domain (PAN_2) Genomic Order:  425
Name:  ? Glyma.04G042500 Secondary Identifier:  ? PAC:30488664
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G042500 0.5kb upstream 0.5kb upstream 3051 true Chr04: 3429221-3432271 Glycine max
Glyma.04G042500 0.5kb upstream 0.5kb upstream 500 false Chr04: 3429221-3429720 Glycine max
Glyma.04G042500 0.5kb downstream 0.5kb downstream 3051 true Chr04: 3429721-3432771 Glycine max
Glyma.04G042500 0.5kb downstream 0.5kb downstream 500 false Chr04: 3432272-3432771 Glycine max
Glyma.04G042500 1.0kb upstream 1.0kb upstream 3551 true Chr04: 3428721-3432271 Glycine max
Glyma.04G042500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3428721-3429720 Glycine max
Glyma.04G042500 1.0kb downstream 1.0kb downstream 3551 true Chr04: 3429721-3433271 Glycine max
Glyma.04G042500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3432272-3433271 Glycine max
Glyma.04G042500 2.0kb upstream 2.0kb upstream 4551 true Chr04: 3427721-3432271 Glycine max
Glyma.04G042500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3427721-3429720 Glycine max
Glyma.04G042500 2.0kb downstream 2.0kb downstream 4551 true Chr04: 3429721-3434271 Glycine max
Glyma.04G042500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3432272-3434271 Glycine max
Glyma.04G042500 5.0kb upstream 5.0kb upstream 7551 true Chr04: 3424721-3432271 Glycine max
Glyma.04G042500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3424721-3429720 Glycine max
Glyma.04G042500 5.0kb downstream 5.0kb downstream 7551 true Chr04: 3429721-3437271 Glycine max
Glyma.04G042500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3432272-3437271 Glycine max
Glyma.04G042500 10.0kb upstream 10.0kb upstream 12551 true Chr04: 3419721-3432271 Glycine max
Glyma.04G042500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3419721-3429720 Glycine max
Glyma.04G042500 10.0kb downstream 10.0kb downstream 12551 true Chr04: 3429721-3442271 Glycine max
Glyma.04G042500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3432272-3442271 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048151 5273 Angiosperm View MSA
122314449 5265 Fabidae View MSA
124071977 5270 Rosid View MSA
123751371 5271 Pentapetalae View MSA
122773994 5272 Eudicot View MSA
121310866 5274 Embryophyte View MSA
123348250 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.2153 0.0 35.2976   High
cufflinks 0.053526 0.0 0.213285 Low Low
cufflinks 0.087997 0.0 0.344154 Low  
cufflinks 0.0676325 0.0 0.267118 Low Low
cufflinks 0.995813 0.0 3.37431    
cufflinks 0.173701 0.0 0.660141 Low  
cufflinks 0.323044 0.0 1.19316    
cufflinks 1.4672 0.0 4.72864    
cufflinks 4.39508 0.0 12.2755   High
cufflinks 0.652        
cufflinks 19.938     High High
cufflinks 0.419        
cufflinks 1.36        
cufflinks 0.081       Low
cufflinks 49.816     High High
cufflinks 0.391        
cufflinks 12.714     High  
cufflinks 0.393        
cufflinks 0.078     Low Low
cufflinks 0.23        
cufflinks 59.118     High High
cufflinks 0.383        
cufflinks 0.083     Low Low
cufflinks 31.032     High High
cufflinks 0.253        
cufflinks 54.774     High High

0 Strain