Gene : Glyma.04G043900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12183:SF14 - RING-FINGER DOMAIN-CONTAINING PROTEIN Genomic Order:  439
Name:  ? Glyma.04G043900 Secondary Identifier:  ? PAC:30490453
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G043900 0.5kb upstream 0.5kb upstream 3553 true Chr04: 3511299-3514851 Glycine max
Glyma.04G043900 0.5kb upstream 0.5kb upstream 500 false Chr04: 3511299-3511798 Glycine max
Glyma.04G043900 0.5kb downstream 0.5kb downstream 3553 true Chr04: 3511799-3515351 Glycine max
Glyma.04G043900 0.5kb downstream 0.5kb downstream 500 false Chr04: 3514852-3515351 Glycine max
Glyma.04G043900 1.0kb upstream 1.0kb upstream 4053 true Chr04: 3510799-3514851 Glycine max
Glyma.04G043900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3510799-3511798 Glycine max
Glyma.04G043900 1.0kb downstream 1.0kb downstream 4053 true Chr04: 3511799-3515851 Glycine max
Glyma.04G043900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3514852-3515851 Glycine max
Glyma.04G043900 2.0kb upstream 2.0kb upstream 5053 true Chr04: 3509799-3514851 Glycine max
Glyma.04G043900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3509799-3511798 Glycine max
Glyma.04G043900 2.0kb downstream 2.0kb downstream 5053 true Chr04: 3511799-3516851 Glycine max
Glyma.04G043900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3514852-3516851 Glycine max
Glyma.04G043900 5.0kb upstream 5.0kb upstream 8053 true Chr04: 3506799-3514851 Glycine max
Glyma.04G043900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3506799-3511798 Glycine max
Glyma.04G043900 5.0kb downstream 5.0kb downstream 8053 true Chr04: 3511799-3519851 Glycine max
Glyma.04G043900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3514852-3519851 Glycine max
Glyma.04G043900 10.0kb upstream 10.0kb upstream 13053 true Chr04: 3501799-3514851 Glycine max
Glyma.04G043900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3501799-3511798 Glycine max
Glyma.04G043900 10.0kb downstream 10.0kb downstream 13053 true Chr04: 3511799-3524851 Glycine max
Glyma.04G043900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3514852-3524851 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301516 5265 Fabidae View MSA
124071043 5270 Rosid View MSA
123646755 5271 Pentapetalae View MSA
122796060 5272 Eudicot View MSA
122049703 5273 Angiosperm View MSA
121349312 5274 Embryophyte View MSA
123381271 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0358836 0.0 0.157222 Low  
cufflinks 0.146252 0.0 0.574951 Low  
cufflinks 0.81162 0.0 5.71306    
cufflinks 2.58036 0.0 8.99356   High
cufflinks 0.194376 0.0 0.757063 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 7.68598 0.0 31.9215   High
cufflinks 0.108794 0.0 0.432039 Low  
cufflinks 0.0138808 0.0 0.0660108 Low Low
cufflinks 0.053     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.423       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  
cufflinks 0.002     Low Low
cufflinks 1.367       High
cufflinks 0.14        
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.025     Low  
cufflinks 0.023     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain