Gene : Glyma.04G050000 G. max Wm82.a2.v1
Defline:  (1 of 14) PF07797 - Protein of unknown function (DUF1639) (DUF1639) Genomic Order:  500
Name:  ? Glyma.04G050000 Secondary Identifier:  ? PAC:30490062
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G050000 0.5kb upstream 0.5kb upstream 7847 true Chr04: 4059010-4066856 Glycine max
Glyma.04G050000 0.5kb upstream 0.5kb upstream 500 false Chr04: 4059010-4059509 Glycine max
Glyma.04G050000 0.5kb downstream 0.5kb downstream 7847 true Chr04: 4059510-4067356 Glycine max
Glyma.04G050000 0.5kb downstream 0.5kb downstream 500 false Chr04: 4066857-4067356 Glycine max
Glyma.04G050000 1.0kb upstream 1.0kb upstream 8347 true Chr04: 4058510-4066856 Glycine max
Glyma.04G050000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4058510-4059509 Glycine max
Glyma.04G050000 1.0kb downstream 1.0kb downstream 8347 true Chr04: 4059510-4067856 Glycine max
Glyma.04G050000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4066857-4067856 Glycine max
Glyma.04G050000 2.0kb upstream 2.0kb upstream 9347 true Chr04: 4057510-4066856 Glycine max
Glyma.04G050000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4057510-4059509 Glycine max
Glyma.04G050000 2.0kb downstream 2.0kb downstream 9347 true Chr04: 4059510-4068856 Glycine max
Glyma.04G050000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4066857-4068856 Glycine max
Glyma.04G050000 5.0kb upstream 5.0kb upstream 12347 true Chr04: 4054510-4066856 Glycine max
Glyma.04G050000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4054510-4059509 Glycine max
Glyma.04G050000 5.0kb downstream 5.0kb downstream 12347 true Chr04: 4059510-4071856 Glycine max
Glyma.04G050000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4066857-4071856 Glycine max
Glyma.04G050000 10.0kb upstream 10.0kb upstream 17347 true Chr04: 4049510-4066856 Glycine max
Glyma.04G050000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4049510-4059509 Glycine max
Glyma.04G050000 10.0kb downstream 10.0kb downstream 17347 true Chr04: 4059510-4076856 Glycine max
Glyma.04G050000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4066857-4076856 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299538 5265 Fabidae View MSA
124068290 5270 Rosid View MSA
123746076 5271 Pentapetalae View MSA
122796883 5272 Eudicot View MSA
122049023 5273 Angiosperm View MSA
121351496 5274 Embryophyte View MSA
123382191 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.8223 0.0 50.4824    
cufflinks 10.0089 0.0 30.0338   Low
cufflinks 22.8361 0.0 68.2753 High High
cufflinks 13.102 0.0 38.6693    
cufflinks 11.6063 0.0 34.3944    
cufflinks 10.5827 0.0 33.599    
cufflinks 12.1167 0.0 35.8724    
cufflinks 15.0101 0.0 44.1605    
cufflinks 12.9627 0.0 38.227    
cufflinks 1.862        
cufflinks 4.005        
cufflinks 3.377        
cufflinks 1.94        
cufflinks 1.8        
cufflinks 3.245        
cufflinks 2.521        
cufflinks 0.961       Low
cufflinks 4.187       High
cufflinks 2.095        
cufflinks 2.832        
cufflinks 5.317       High
cufflinks 2.673        
cufflinks 1.819        
cufflinks 3.963        
cufflinks 2.866        
cufflinks 4.024        

0 Strain