Gene : Glyma.04G049700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31490:SF1 - F19C14.2 PROTEIN-RELATED Genomic Order:  497
Name:  ? Glyma.04G049700 Secondary Identifier:  ? PAC:30489916
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G049700 0.5kb upstream 0.5kb upstream 4288 true Chr04: 4028381-4032668 Glycine max
Glyma.04G049700 0.5kb upstream 0.5kb upstream 500 false Chr04: 4032169-4032668 Glycine max
Glyma.04G049700 0.5kb downstream 0.5kb downstream 4288 true Chr04: 4027881-4032168 Glycine max
Glyma.04G049700 0.5kb downstream 0.5kb downstream 500 false Chr04: 4027881-4028380 Glycine max
Glyma.04G049700 1.0kb upstream 1.0kb upstream 4788 true Chr04: 4028381-4033168 Glycine max
Glyma.04G049700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4032169-4033168 Glycine max
Glyma.04G049700 1.0kb downstream 1.0kb downstream 4788 true Chr04: 4027381-4032168 Glycine max
Glyma.04G049700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4027381-4028380 Glycine max
Glyma.04G049700 2.0kb upstream 2.0kb upstream 5788 true Chr04: 4028381-4034168 Glycine max
Glyma.04G049700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4032169-4034168 Glycine max
Glyma.04G049700 2.0kb downstream 2.0kb downstream 5788 true Chr04: 4026381-4032168 Glycine max
Glyma.04G049700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4026381-4028380 Glycine max
Glyma.04G049700 5.0kb upstream 5.0kb upstream 8788 true Chr04: 4028381-4037168 Glycine max
Glyma.04G049700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4032169-4037168 Glycine max
Glyma.04G049700 5.0kb downstream 5.0kb downstream 8788 true Chr04: 4023381-4032168 Glycine max
Glyma.04G049700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4023381-4028380 Glycine max
Glyma.04G049700 10.0kb upstream 10.0kb upstream 13788 true Chr04: 4028381-4042168 Glycine max
Glyma.04G049700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4032169-4042168 Glycine max
Glyma.04G049700 10.0kb downstream 10.0kb downstream 13788 true Chr04: 4018381-4032168 Glycine max
Glyma.04G049700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4018381-4028380 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297174 5265 Fabidae View MSA
124066828 5270 Rosid View MSA
123742236 5271 Pentapetalae View MSA
122786340 5272 Eudicot View MSA
122047511 5273 Angiosperm View MSA
121347321 5274 Embryophyte View MSA
123426707 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.387849 0.0 1.79263    
cufflinks 1.00238 0.0 3.90406    
cufflinks 0.614419 0.0 2.69377    
cufflinks 0.351393 0.0 1.61783   Low
cufflinks 1.31725 0.0 4.69773    
cufflinks 0.840181 0.0 3.37163    
cufflinks 0.264387 0.0 1.30214   Low
cufflinks 1.16163 0.0 4.23656    
cufflinks 2.93533 0.0 10.81   High
cufflinks 2.833       High
cufflinks 0.191       Low
cufflinks 0.46        
cufflinks 2.43       High
cufflinks 0.562        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.964        
cufflinks 0.408        
cufflinks 0.965        
cufflinks 0.416        
cufflinks 0.992        
cufflinks 0.2       Low
cufflinks 1.003        
cufflinks 0.791        
cufflinks 0.07       Low
cufflinks 0.867        
cufflinks 0.493        

0 Strain