Gene : Glyma.04G048800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13018:SF31 - LIPASE/HYDROLASE Genomic Order:  488
Name:  ? Glyma.04G048800 Secondary Identifier:  ? PAC:30487540
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G048800 0.5kb upstream 0.5kb upstream 11202 true Chr04: 3944567-3955768 Glycine max
Glyma.04G048800 0.5kb upstream 0.5kb upstream 500 false Chr04: 3944567-3945066 Glycine max
Glyma.04G048800 0.5kb downstream 0.5kb downstream 11202 true Chr04: 3945067-3956268 Glycine max
Glyma.04G048800 0.5kb downstream 0.5kb downstream 500 false Chr04: 3955769-3956268 Glycine max
Glyma.04G048800 1.0kb upstream 1.0kb upstream 11702 true Chr04: 3944067-3955768 Glycine max
Glyma.04G048800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3944067-3945066 Glycine max
Glyma.04G048800 1.0kb downstream 1.0kb downstream 11702 true Chr04: 3945067-3956768 Glycine max
Glyma.04G048800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3955769-3956768 Glycine max
Glyma.04G048800 2.0kb upstream 2.0kb upstream 12702 true Chr04: 3943067-3955768 Glycine max
Glyma.04G048800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3943067-3945066 Glycine max
Glyma.04G048800 2.0kb downstream 2.0kb downstream 12702 true Chr04: 3945067-3957768 Glycine max
Glyma.04G048800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3955769-3957768 Glycine max
Glyma.04G048800 5.0kb upstream 5.0kb upstream 15702 true Chr04: 3940067-3955768 Glycine max
Glyma.04G048800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3940067-3945066 Glycine max
Glyma.04G048800 5.0kb downstream 5.0kb downstream 15702 true Chr04: 3945067-3960768 Glycine max
Glyma.04G048800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3955769-3960768 Glycine max
Glyma.04G048800 10.0kb upstream 10.0kb upstream 20702 true Chr04: 3935067-3955768 Glycine max
Glyma.04G048800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3935067-3945066 Glycine max
Glyma.04G048800 10.0kb downstream 10.0kb downstream 20702 true Chr04: 3945067-3965768 Glycine max
Glyma.04G048800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3955769-3965768 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315122 5265 Fabidae View MSA
124066358 5270 Rosid View MSA
123746920 5271 Pentapetalae View MSA
122790536 5272 Eudicot View MSA
122043490 5273 Angiosperm View MSA
123429118 5275 Viridiplantae View MSA
121349616 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0428922 0.0 0.173187 Low  
cufflinks 0.644195 0.0 2.29279   High
cufflinks 0.0954419 0.0 0.373924 Low  
cufflinks 0.0225104 0.0 0.0942027 Low  
cufflinks 0.0648277 0.0 0.257464 Low  
cufflinks 0.218451 0.0 0.826865    
cufflinks 0.0175127 0.0 0.0746774 Low  
cufflinks 0.00878789 0.0 0.0397476 Low Low
cufflinks 0.001     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.072     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.306       High
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain