Gene : Glyma.19G152500 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR14859 - CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR Genomic Order:  1525
Name:  ? Glyma.19G152500 Secondary Identifier:  ? PAC:30515162
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G152500 0.5kb upstream 0.5kb upstream 3927 true Chr19: 41290025-41293951 Glycine max
Glyma.19G152500 0.5kb upstream 0.5kb upstream 500 false Chr19: 41293452-41293951 Glycine max
Glyma.19G152500 0.5kb downstream 0.5kb downstream 3927 true Chr19: 41289525-41293451 Glycine max
Glyma.19G152500 0.5kb downstream 0.5kb downstream 500 false Chr19: 41289525-41290024 Glycine max
Glyma.19G152500 1.0kb upstream 1.0kb upstream 4427 true Chr19: 41290025-41294451 Glycine max
Glyma.19G152500 1.0kb upstream 1.0kb upstream 1000 false Chr19: 41293452-41294451 Glycine max
Glyma.19G152500 1.0kb downstream 1.0kb downstream 4427 true Chr19: 41289025-41293451 Glycine max
Glyma.19G152500 1.0kb downstream 1.0kb downstream 1000 false Chr19: 41289025-41290024 Glycine max
Glyma.19G152500 2.0kb upstream 2.0kb upstream 5427 true Chr19: 41290025-41295451 Glycine max
Glyma.19G152500 2.0kb upstream 2.0kb upstream 2000 false Chr19: 41293452-41295451 Glycine max
Glyma.19G152500 2.0kb downstream 2.0kb downstream 5427 true Chr19: 41288025-41293451 Glycine max
Glyma.19G152500 2.0kb downstream 2.0kb downstream 2000 false Chr19: 41288025-41290024 Glycine max
Glyma.19G152500 5.0kb upstream 5.0kb upstream 8427 true Chr19: 41290025-41298451 Glycine max
Glyma.19G152500 5.0kb upstream 5.0kb upstream 5000 false Chr19: 41293452-41298451 Glycine max
Glyma.19G152500 5.0kb downstream 5.0kb downstream 8427 true Chr19: 41285025-41293451 Glycine max
Glyma.19G152500 5.0kb downstream 5.0kb downstream 5000 false Chr19: 41285025-41290024 Glycine max
Glyma.19G152500 10.0kb upstream 10.0kb upstream 13427 true Chr19: 41290025-41303451 Glycine max
Glyma.19G152500 10.0kb upstream 10.0kb upstream 10000 false Chr19: 41293452-41303451 Glycine max
Glyma.19G152500 10.0kb downstream 10.0kb downstream 13427 true Chr19: 41280025-41293451 Glycine max
Glyma.19G152500 10.0kb downstream 10.0kb downstream 10000 false Chr19: 41280025-41290024 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254300 5265 Fabidae View MSA
124067214 5270 Rosid View MSA
123743998 5271 Pentapetalae View MSA
122789343 5272 Eudicot View MSA
122044704 5273 Angiosperm View MSA
121310332 5274 Embryophyte View MSA
123347845 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.189279 0.0 0.734254 Low Low
cufflinks 0.340309 0.0 1.28642    
cufflinks 0.103385 0.0 0.410298 Low Low
cufflinks 0.564938 0.0 2.08459    
cufflinks 1.39136 0.0 4.81778    
cufflinks 1.31723 0.0 4.59174    
cufflinks 6.01292 0.0 17.2453   High
cufflinks 2.84304 0.0 8.99221   High
cufflinks 0.440283 0.0 1.6442    
cufflinks 1.448       High
cufflinks 0.029     Low  
cufflinks 0.134        
cufflinks 0.503       High
cufflinks 0.213        
cufflinks 0.038     Low  
cufflinks 0.124        
cufflinks 0.385       High
cufflinks 0.093     Low  
cufflinks 0.04     Low  
cufflinks 0.011     Low Low
cufflinks 0.012     Low Low
cufflinks 0.005     Low Low
cufflinks 0.062     Low  
cufflinks 0.017     Low  
cufflinks 0.037     Low  
cufflinks 0.053     Low  

0 Strain