Gene : Glyma.04G048900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10641:SF519 - TRANSCRIPTION FACTOR RAX2 Genomic Order:  489
Name:  ? Glyma.04G048900 Secondary Identifier:  ? PAC:30487874
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G048900 0.5kb upstream 0.5kb upstream 2620 true Chr04: 3961678-3964297 Glycine max
Glyma.04G048900 0.5kb upstream 0.5kb upstream 500 false Chr04: 3963798-3964297 Glycine max
Glyma.04G048900 0.5kb downstream 0.5kb downstream 2620 true Chr04: 3961178-3963797 Glycine max
Glyma.04G048900 0.5kb downstream 0.5kb downstream 500 false Chr04: 3961178-3961677 Glycine max
Glyma.04G048900 1.0kb upstream 1.0kb upstream 3120 true Chr04: 3961678-3964797 Glycine max
Glyma.04G048900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3963798-3964797 Glycine max
Glyma.04G048900 1.0kb downstream 1.0kb downstream 3120 true Chr04: 3960678-3963797 Glycine max
Glyma.04G048900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3960678-3961677 Glycine max
Glyma.04G048900 2.0kb upstream 2.0kb upstream 4120 true Chr04: 3961678-3965797 Glycine max
Glyma.04G048900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3963798-3965797 Glycine max
Glyma.04G048900 2.0kb downstream 2.0kb downstream 4120 true Chr04: 3959678-3963797 Glycine max
Glyma.04G048900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3959678-3961677 Glycine max
Glyma.04G048900 5.0kb upstream 5.0kb upstream 7120 true Chr04: 3961678-3968797 Glycine max
Glyma.04G048900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3963798-3968797 Glycine max
Glyma.04G048900 5.0kb downstream 5.0kb downstream 7120 true Chr04: 3956678-3963797 Glycine max
Glyma.04G048900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3956678-3961677 Glycine max
Glyma.04G048900 10.0kb upstream 10.0kb upstream 12120 true Chr04: 3961678-3973797 Glycine max
Glyma.04G048900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3963798-3973797 Glycine max
Glyma.04G048900 10.0kb downstream 10.0kb downstream 12120 true Chr04: 3951678-3963797 Glycine max
Glyma.04G048900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3951678-3961677 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311579 5265 Fabidae View MSA
124071714 5270 Rosid View MSA
123746695 5271 Pentapetalae View MSA
122790538 5272 Eudicot View MSA
122047860 5273 Angiosperm View MSA
121310809 5274 Embryophyte View MSA
123348206 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0214977 0.0 0.0931186 Low  
cufflinks 1.43323 0.0 4.94755   High
cufflinks 0.39776 0.0 1.49242    
cufflinks 0.0115777 0.0 0.0530282 Low Low
cufflinks 0.0258186 0.0 0.110096 Low  
cufflinks 1.78737 0.0 6.01435   High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.225        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.018        
cufflinks 0.51        
cufflinks 0.053       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.653        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.092        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.032        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.919        

0 Strain