Gene : Glyma.04G047000 G. max Wm82.a2.v1
Defline:  (1 of 2) 2.3.1.43 - Phosphatidylcholine--sterol O-acyltransferase / Phospholipid--cholesterol acyltransferase Genomic Order:  470
Name:  ? Glyma.04G047000 Secondary Identifier:  ? PAC:30490180
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G047000 0.5kb upstream 0.5kb upstream 2200 true Chr04: 3775053-3777252 Glycine max
Glyma.04G047000 0.5kb upstream 0.5kb upstream 500 false Chr04: 3775053-3775552 Glycine max
Glyma.04G047000 0.5kb downstream 0.5kb downstream 2200 true Chr04: 3775553-3777752 Glycine max
Glyma.04G047000 0.5kb downstream 0.5kb downstream 500 false Chr04: 3777253-3777752 Glycine max
Glyma.04G047000 1.0kb upstream 1.0kb upstream 2700 true Chr04: 3774553-3777252 Glycine max
Glyma.04G047000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3774553-3775552 Glycine max
Glyma.04G047000 1.0kb downstream 1.0kb downstream 2700 true Chr04: 3775553-3778252 Glycine max
Glyma.04G047000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3777253-3778252 Glycine max
Glyma.04G047000 2.0kb upstream 2.0kb upstream 3700 true Chr04: 3773553-3777252 Glycine max
Glyma.04G047000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3773553-3775552 Glycine max
Glyma.04G047000 2.0kb downstream 2.0kb downstream 3700 true Chr04: 3775553-3779252 Glycine max
Glyma.04G047000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3777253-3779252 Glycine max
Glyma.04G047000 5.0kb upstream 5.0kb upstream 6700 true Chr04: 3770553-3777252 Glycine max
Glyma.04G047000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3770553-3775552 Glycine max
Glyma.04G047000 5.0kb downstream 5.0kb downstream 6700 true Chr04: 3775553-3782252 Glycine max
Glyma.04G047000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3777253-3782252 Glycine max
Glyma.04G047000 10.0kb upstream 10.0kb upstream 11700 true Chr04: 3765553-3777252 Glycine max
Glyma.04G047000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3765553-3775552 Glycine max
Glyma.04G047000 10.0kb downstream 10.0kb downstream 11700 true Chr04: 3775553-3787252 Glycine max
Glyma.04G047000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3777253-3787252 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122248795 5265 Fabidae Singleton cluster - no MSA
123992325 5270 Rosid Singleton cluster - no MSA
123567201 5271 Pentapetalae Singleton cluster - no MSA
122601953 5272 Eudicot Singleton cluster - no MSA
122051550 5273 Angiosperm View MSA
121347013 5274 Embryophyte View MSA
123427608 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.143298 0.0 0.573667 Low Low
cufflinks 2.10434 0.0 7.38593   High
cufflinks 0.131511 0.0 0.527525 Low Low
cufflinks 0.279362 0.0 1.09055    
cufflinks 0.43898 0.0 1.68149    
cufflinks 0.483605 0.0 1.84489    
cufflinks 0.184031 0.0 0.729429 Low  
cufflinks 0.408104 0.0 1.56625    
cufflinks 0.303442 0.0 1.18076    
cufflinks 0.586        
cufflinks 0.01     Low Low
cufflinks 0.91        
cufflinks 0.607        
cufflinks 0.801        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.877        
cufflinks 0.028     Low Low
cufflinks 0.869        
cufflinks 2.112       High
cufflinks 0.584        
cufflinks 0.023     Low Low
cufflinks 0.7        
cufflinks 0.699        
cufflinks 0.055     Low  
cufflinks 0.625        
cufflinks 0.039     Low Low

0 Strain