Gene : Glyma.04G051800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR24089:SF342 - PROTEIN R07E3.4 Genomic Order:  518
Name:  ? Glyma.04G051800 Secondary Identifier:  ? PAC:30489467
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G051800 0.5kb upstream 0.5kb upstream 5399 true Chr04: 4193748-4199146 Glycine max
Glyma.04G051800 0.5kb upstream 0.5kb upstream 500 false Chr04: 4193748-4194247 Glycine max
Glyma.04G051800 0.5kb downstream 0.5kb downstream 5399 true Chr04: 4194248-4199646 Glycine max
Glyma.04G051800 0.5kb downstream 0.5kb downstream 500 false Chr04: 4199147-4199646 Glycine max
Glyma.04G051800 1.0kb upstream 1.0kb upstream 5899 true Chr04: 4193248-4199146 Glycine max
Glyma.04G051800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4193248-4194247 Glycine max
Glyma.04G051800 1.0kb downstream 1.0kb downstream 5899 true Chr04: 4194248-4200146 Glycine max
Glyma.04G051800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4199147-4200146 Glycine max
Glyma.04G051800 2.0kb upstream 2.0kb upstream 6899 true Chr04: 4192248-4199146 Glycine max
Glyma.04G051800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4192248-4194247 Glycine max
Glyma.04G051800 2.0kb downstream 2.0kb downstream 6899 true Chr04: 4194248-4201146 Glycine max
Glyma.04G051800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4199147-4201146 Glycine max
Glyma.04G051800 5.0kb upstream 5.0kb upstream 9899 true Chr04: 4189248-4199146 Glycine max
Glyma.04G051800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4189248-4194247 Glycine max
Glyma.04G051800 5.0kb downstream 5.0kb downstream 9899 true Chr04: 4194248-4204146 Glycine max
Glyma.04G051800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4199147-4204146 Glycine max
Glyma.04G051800 10.0kb upstream 10.0kb upstream 14899 true Chr04: 4184248-4199146 Glycine max
Glyma.04G051800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4184248-4194247 Glycine max
Glyma.04G051800 10.0kb downstream 10.0kb downstream 14899 true Chr04: 4194248-4209146 Glycine max
Glyma.04G051800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4199147-4209146 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307012 5265 Fabidae View MSA
124065765 5270 Rosid View MSA
123737630 5271 Pentapetalae View MSA
122792945 5272 Eudicot View MSA
122042720 5273 Angiosperm View MSA
121346256 5274 Embryophyte View MSA
123427851 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.69446 0.0 8.63303    
cufflinks 1.47188 0.0 5.09576   Low
cufflinks 2.96527 0.0 9.36744    
cufflinks 3.24681 0.0 10.1275    
cufflinks 2.45324 0.0 7.94638    
cufflinks 3.53725 0.0 10.8869   High
cufflinks 2.53904 0.0 8.18973    
cufflinks 1.96104 0.0 6.56734    
cufflinks 1.6716 0.0 5.6999   Low
cufflinks 1.708       High
cufflinks 0.464        
cufflinks 0.993        
cufflinks 0.809        
cufflinks 0.591        
cufflinks 0.238       Low
cufflinks 0.311        
cufflinks 5.369       High
cufflinks 0.858        
cufflinks 0.538        
cufflinks 0.439        
cufflinks 0.311        
cufflinks 0.405        
cufflinks 0.64        
cufflinks 0.479        
cufflinks 0.308        
cufflinks 0.619        

0 Strain