Gene : Glyma.04G057000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12483//PTHR12483:SF39 - SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS Genomic Order:  570
Name:  ? Glyma.04G057000 Secondary Identifier:  ? PAC:30489123
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G057000 0.5kb upstream 0.5kb upstream 1539 true Chr04: 4621229-4622767 Glycine max
Glyma.04G057000 0.5kb upstream 0.5kb upstream 500 false Chr04: 4622268-4622767 Glycine max
Glyma.04G057000 0.5kb downstream 0.5kb downstream 1539 true Chr04: 4620729-4622267 Glycine max
Glyma.04G057000 0.5kb downstream 0.5kb downstream 500 false Chr04: 4620729-4621228 Glycine max
Glyma.04G057000 1.0kb upstream 1.0kb upstream 2039 true Chr04: 4621229-4623267 Glycine max
Glyma.04G057000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4622268-4623267 Glycine max
Glyma.04G057000 1.0kb downstream 1.0kb downstream 2039 true Chr04: 4620229-4622267 Glycine max
Glyma.04G057000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4620229-4621228 Glycine max
Glyma.04G057000 2.0kb upstream 2.0kb upstream 3039 true Chr04: 4621229-4624267 Glycine max
Glyma.04G057000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4622268-4624267 Glycine max
Glyma.04G057000 2.0kb downstream 2.0kb downstream 3039 true Chr04: 4619229-4622267 Glycine max
Glyma.04G057000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4619229-4621228 Glycine max
Glyma.04G057000 5.0kb upstream 5.0kb upstream 6039 true Chr04: 4621229-4627267 Glycine max
Glyma.04G057000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4622268-4627267 Glycine max
Glyma.04G057000 5.0kb downstream 5.0kb downstream 6039 true Chr04: 4616229-4622267 Glycine max
Glyma.04G057000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4616229-4621228 Glycine max
Glyma.04G057000 10.0kb upstream 10.0kb upstream 11039 true Chr04: 4621229-4632267 Glycine max
Glyma.04G057000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4622268-4632267 Glycine max
Glyma.04G057000 10.0kb downstream 10.0kb downstream 11039 true Chr04: 4611229-4622267 Glycine max
Glyma.04G057000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4611229-4621228 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309978 5265 Fabidae View MSA
124062976 5270 Rosid View MSA
123743336 5271 Pentapetalae View MSA
122785642 5272 Eudicot View MSA
122044839 5273 Angiosperm View MSA
121351716 5274 Embryophyte View MSA
123428463 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.0672 0.0 77.7754 High  
cufflinks 6.37239 0.0 19.7103   Low
cufflinks 70.4012 0.0 191.711 High High
cufflinks 19.5779 0.0 53.3445    
cufflinks 30.3011 0.0 80.954 High  
cufflinks 35.0012 0.0 93.3833 High  
cufflinks 38.8408 0.0 103.639 High  
cufflinks 43.5325 0.0 116.289 High  
cufflinks 27.3827 0.0 73.351 High  
cufflinks 18.111     High High
cufflinks 9.821     High  
cufflinks 19.868     High High
cufflinks 7.505     High Low
cufflinks 5.338       Low
cufflinks 15.248     High  
cufflinks 13.479     High  
cufflinks 18.39     High High
cufflinks 11.491     High  
cufflinks 13.434     High  
cufflinks 13.671     High  
cufflinks 9.205     High  
cufflinks 11.37     High  
cufflinks 12.253     High  
cufflinks 13.163     High  
cufflinks 10.284     High  
cufflinks 10.353     High  

0 Strain