Gene : Glyma.04G061000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR20856:SF21 - DNA-DIRECTED RNA POLYMERASE D SUBUNIT 2B-RELATED Genomic Order:  610
Name:  ? Glyma.04G061000 Secondary Identifier:  ? PAC:30490824
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G061000 0.5kb upstream 0.5kb upstream 6014 true Chr04: 4973139-4979152 Glycine max
Glyma.04G061000 0.5kb upstream 0.5kb upstream 500 false Chr04: 4978653-4979152 Glycine max
Glyma.04G061000 0.5kb downstream 0.5kb downstream 6014 true Chr04: 4972639-4978652 Glycine max
Glyma.04G061000 0.5kb downstream 0.5kb downstream 500 false Chr04: 4972639-4973138 Glycine max
Glyma.04G061000 1.0kb upstream 1.0kb upstream 6514 true Chr04: 4973139-4979652 Glycine max
Glyma.04G061000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4978653-4979652 Glycine max
Glyma.04G061000 1.0kb downstream 1.0kb downstream 6514 true Chr04: 4972139-4978652 Glycine max
Glyma.04G061000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4972139-4973138 Glycine max
Glyma.04G061000 2.0kb upstream 2.0kb upstream 7514 true Chr04: 4973139-4980652 Glycine max
Glyma.04G061000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4978653-4980652 Glycine max
Glyma.04G061000 2.0kb downstream 2.0kb downstream 7514 true Chr04: 4971139-4978652 Glycine max
Glyma.04G061000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4971139-4973138 Glycine max
Glyma.04G061000 5.0kb upstream 5.0kb upstream 10514 true Chr04: 4973139-4983652 Glycine max
Glyma.04G061000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4978653-4983652 Glycine max
Glyma.04G061000 5.0kb downstream 5.0kb downstream 10514 true Chr04: 4968139-4978652 Glycine max
Glyma.04G061000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4968139-4973138 Glycine max
Glyma.04G061000 10.0kb upstream 10.0kb upstream 15514 true Chr04: 4973139-4988652 Glycine max
Glyma.04G061000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4978653-4988652 Glycine max
Glyma.04G061000 10.0kb downstream 10.0kb downstream 15514 true Chr04: 4963139-4978652 Glycine max
Glyma.04G061000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4963139-4973138 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041349 5273 Angiosperm View MSA
122304466 5265 Fabidae View MSA
124060489 5270 Rosid View MSA
123745047 5271 Pentapetalae View MSA
122791134 5272 Eudicot View MSA
121350005 5274 Embryophyte View MSA
123428402 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.10427 0.0 13.69    
cufflinks 17.6416 0.0 49.2039   High
cufflinks 5.38468 0.0 14.4191    
cufflinks 7.94476 0.0 21.2106    
cufflinks 6.65046 0.0 17.7453    
cufflinks 7.37774 0.0 19.6849    
cufflinks 22.0749 0.0 63.1745 High High
cufflinks 5.50596 0.0 14.7354    
cufflinks 5.42728 0.0 14.5297    
cufflinks 5.799        
cufflinks 0.861       Low
cufflinks 7.143        
cufflinks 7.464     High  
cufflinks 6.578        
cufflinks 1.451       Low
cufflinks 10.464     High  
cufflinks 1.953        
cufflinks 6.912        
cufflinks 21.975     High High
cufflinks 4.924        
cufflinks 1.238       Low
cufflinks 7.71     High  
cufflinks 13.502     High High
cufflinks 1.718       Low
cufflinks 5.571        
cufflinks 3.546        

0 Strain