Gene : Glyma.19G154100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11592:SF17 - GLUTATHIONE PEROXIDASE 4-RELATED Genomic Order:  1541
Name:  ? Glyma.19G154100 Secondary Identifier:  ? PAC:30513871
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax DETOX1-PWY-1 Glycine max pathologic  
Gmax PWY-4081 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G154100 0.5kb upstream 0.5kb upstream 5562 true Chr19: 41429637-41435198 Glycine max
Glyma.19G154100 0.5kb upstream 0.5kb upstream 500 false Chr19: 41429637-41430136 Glycine max
Glyma.19G154100 0.5kb downstream 0.5kb downstream 5562 true Chr19: 41430137-41435698 Glycine max
Glyma.19G154100 0.5kb downstream 0.5kb downstream 500 false Chr19: 41435199-41435698 Glycine max
Glyma.19G154100 1.0kb upstream 1.0kb upstream 6062 true Chr19: 41429137-41435198 Glycine max
Glyma.19G154100 1.0kb upstream 1.0kb upstream 1000 false Chr19: 41429137-41430136 Glycine max
Glyma.19G154100 1.0kb downstream 1.0kb downstream 6062 true Chr19: 41430137-41436198 Glycine max
Glyma.19G154100 1.0kb downstream 1.0kb downstream 1000 false Chr19: 41435199-41436198 Glycine max
Glyma.19G154100 2.0kb upstream 2.0kb upstream 7062 true Chr19: 41428137-41435198 Glycine max
Glyma.19G154100 2.0kb upstream 2.0kb upstream 2000 false Chr19: 41428137-41430136 Glycine max
Glyma.19G154100 2.0kb downstream 2.0kb downstream 7062 true Chr19: 41430137-41437198 Glycine max
Glyma.19G154100 2.0kb downstream 2.0kb downstream 2000 false Chr19: 41435199-41437198 Glycine max
Glyma.19G154100 5.0kb upstream 5.0kb upstream 10062 true Chr19: 41425137-41435198 Glycine max
Glyma.19G154100 5.0kb upstream 5.0kb upstream 5000 false Chr19: 41425137-41430136 Glycine max
Glyma.19G154100 5.0kb downstream 5.0kb downstream 10062 true Chr19: 41430137-41440198 Glycine max
Glyma.19G154100 5.0kb downstream 5.0kb downstream 5000 false Chr19: 41435199-41440198 Glycine max
Glyma.19G154100 10.0kb upstream 10.0kb upstream 15062 true Chr19: 41420137-41435198 Glycine max
Glyma.19G154100 10.0kb upstream 10.0kb upstream 10000 false Chr19: 41420137-41430136 Glycine max
Glyma.19G154100 10.0kb downstream 10.0kb downstream 15062 true Chr19: 41430137-41445198 Glycine max
Glyma.19G154100 10.0kb downstream 10.0kb downstream 10000 false Chr19: 41435199-41445198 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026200 5273 Angiosperm View MSA
122303343 5265 Fabidae View MSA
124065058 5270 Rosid View MSA
123743608 5271 Pentapetalae View MSA
122796492 5272 Eudicot View MSA
121296225 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 41.0052 0.0 191.85 High  
cufflinks 51.8762 0.0 226.557 High  
cufflinks 53.3146 0.0 227.839 High  
cufflinks 73.5012 0.0 304.572 High High
cufflinks 13.4806 0.0 53.3272   Low
cufflinks 25.2977 0.0 90.5548 High  
cufflinks 61.4624 0.0 244.584 High  
cufflinks 71.1937 0.0 294.729 High  
cufflinks 23.8428 0.0 106.707 High  
cufflinks 6.214        
cufflinks 0.594       Low
cufflinks 4.073        
cufflinks 1.038        
cufflinks 0.705       Low
cufflinks 0.33       Low
cufflinks 5.718        
cufflinks 1.531        
cufflinks 6.734       High
cufflinks 4.435        
cufflinks 5.32        
cufflinks 0.815        
cufflinks 5.546        
cufflinks 5.245        
cufflinks 1.047        
cufflinks 6.259       High
cufflinks 0.997        

0 Strain