Gene : Glyma.04G060800 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR32370:SF7 - BTB/POZ DOMAIN-CONTAINING PROTEIN NPY1 Genomic Order:  608
Name:  ? Glyma.04G060800 Secondary Identifier:  ? PAC:30488904
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G060800 0.5kb upstream 0.5kb upstream 5378 true Chr04: 4960752-4966129 Glycine max
Glyma.04G060800 0.5kb upstream 0.5kb upstream 500 false Chr04: 4960752-4961251 Glycine max
Glyma.04G060800 0.5kb downstream 0.5kb downstream 5378 true Chr04: 4961252-4966629 Glycine max
Glyma.04G060800 0.5kb downstream 0.5kb downstream 500 false Chr04: 4966130-4966629 Glycine max
Glyma.04G060800 1.0kb upstream 1.0kb upstream 5878 true Chr04: 4960252-4966129 Glycine max
Glyma.04G060800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4960252-4961251 Glycine max
Glyma.04G060800 1.0kb downstream 1.0kb downstream 5878 true Chr04: 4961252-4967129 Glycine max
Glyma.04G060800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4966130-4967129 Glycine max
Glyma.04G060800 2.0kb upstream 2.0kb upstream 6878 true Chr04: 4959252-4966129 Glycine max
Glyma.04G060800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4959252-4961251 Glycine max
Glyma.04G060800 2.0kb downstream 2.0kb downstream 6878 true Chr04: 4961252-4968129 Glycine max
Glyma.04G060800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4966130-4968129 Glycine max
Glyma.04G060800 5.0kb upstream 5.0kb upstream 9878 true Chr04: 4956252-4966129 Glycine max
Glyma.04G060800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4956252-4961251 Glycine max
Glyma.04G060800 5.0kb downstream 5.0kb downstream 9878 true Chr04: 4961252-4971129 Glycine max
Glyma.04G060800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4966130-4971129 Glycine max
Glyma.04G060800 10.0kb upstream 10.0kb upstream 14878 true Chr04: 4951252-4966129 Glycine max
Glyma.04G060800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4951252-4961251 Glycine max
Glyma.04G060800 10.0kb downstream 10.0kb downstream 14878 true Chr04: 4961252-4976129 Glycine max
Glyma.04G060800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4966130-4976129 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253815 5265 Fabidae View MSA
124067835 5270 Rosid View MSA
123737870 5271 Pentapetalae View MSA
122787128 5272 Eudicot View MSA
122043387 5273 Angiosperm View MSA
121310115 5274 Embryophyte View MSA
123347692 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0182199 0.0 0.0820193 Low Low
cufflinks 4.91849 0.0 20.6334   High
cufflinks 0.532276 0.0 3.103    
cufflinks 0.426028 0.0 2.55719    
cufflinks 1.29042 0.0 6.22623    
cufflinks 4.14161 0.0 16.2684    
cufflinks 2.99757 0.0 13.0177    
cufflinks 0.873025 0.0 5.65638    
cufflinks 0.794588 0.0 4.46701    
cufflinks 0.389        
cufflinks 0.129        
cufflinks 0.236        
cufflinks 0.821       High
cufflinks 0.898       High
cufflinks 0.068       Low
cufflinks 0.495        
cufflinks 0.075       Low
cufflinks 0.496        
cufflinks 1.327       High
cufflinks 0.304        
cufflinks 0.149        
cufflinks 0.335        
cufflinks 0.662        
cufflinks 0.071       Low
cufflinks 0.402        
cufflinks 0.211        

0 Strain