Gene : Glyma.04G058300 G. max Wm82.a2.v1
Defline:  (1 of 12) PTHR24006:SF503 - TRAF-LIKE FAMILY PROTEIN-RELATED Genomic Order:  583
Name:  ? Glyma.04G058300 Secondary Identifier:  ? PAC:30487666
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G058300 0.5kb upstream 0.5kb upstream 6193 true Chr04: 4776379-4782571 Glycine max
Glyma.04G058300 0.5kb upstream 0.5kb upstream 500 false Chr04: 4782072-4782571 Glycine max
Glyma.04G058300 0.5kb downstream 0.5kb downstream 6193 true Chr04: 4775879-4782071 Glycine max
Glyma.04G058300 0.5kb downstream 0.5kb downstream 500 false Chr04: 4775879-4776378 Glycine max
Glyma.04G058300 1.0kb upstream 1.0kb upstream 6693 true Chr04: 4776379-4783071 Glycine max
Glyma.04G058300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4782072-4783071 Glycine max
Glyma.04G058300 1.0kb downstream 1.0kb downstream 6693 true Chr04: 4775379-4782071 Glycine max
Glyma.04G058300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4775379-4776378 Glycine max
Glyma.04G058300 2.0kb upstream 2.0kb upstream 7693 true Chr04: 4776379-4784071 Glycine max
Glyma.04G058300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4782072-4784071 Glycine max
Glyma.04G058300 2.0kb downstream 2.0kb downstream 7693 true Chr04: 4774379-4782071 Glycine max
Glyma.04G058300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4774379-4776378 Glycine max
Glyma.04G058300 5.0kb upstream 5.0kb upstream 10693 true Chr04: 4776379-4787071 Glycine max
Glyma.04G058300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4782072-4787071 Glycine max
Glyma.04G058300 5.0kb downstream 5.0kb downstream 10693 true Chr04: 4771379-4782071 Glycine max
Glyma.04G058300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4771379-4776378 Glycine max
Glyma.04G058300 10.0kb upstream 10.0kb upstream 15693 true Chr04: 4776379-4792071 Glycine max
Glyma.04G058300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4782072-4792071 Glycine max
Glyma.04G058300 10.0kb downstream 10.0kb downstream 15693 true Chr04: 4766379-4782071 Glycine max
Glyma.04G058300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4766379-4776378 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312003 5265 Fabidae View MSA
124069619 5270 Rosid View MSA
123738264 5271 Pentapetalae View MSA
122797340 5272 Eudicot View MSA
122048060 5273 Angiosperm View MSA
121350818 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.56994 0.0 7.52676   Low
cufflinks 6.87879 0.0 18.482   High
cufflinks 5.93609 0.0 16.0371    
cufflinks 2.99728 0.0 8.59748   Low
cufflinks 5.25711 0.0 14.341    
cufflinks 5.32259 0.0 14.498    
cufflinks 3.59184 0.0 10.1289    
cufflinks 5.0239 0.0 13.7204    
cufflinks 6.23271 0.0 16.8229    
cufflinks 1.875        
cufflinks 1.575       Low
cufflinks 5.412       High
cufflinks 3.515        
cufflinks 4.103        
cufflinks 1.533       Low
cufflinks 2.131        
cufflinks 2.656        
cufflinks 7.782     High High
cufflinks 4.982       High
cufflinks 2.047        
cufflinks 1.768        
cufflinks 2.578        
cufflinks 3.198        
cufflinks 2.623        
cufflinks 1.826        
cufflinks 1.516       Low

0 Strain