Gene : Glyma.04G007900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR34550:SF2 - 30S RIBOSOMAL PROTEIN S31, MITOCHONDRIAL Genomic Order:  79
Name:  ? Glyma.04G007900 Secondary Identifier:  ? PAC:30487266
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G007900 0.5kb upstream 0.5kb upstream 1138 true Chr04: 612373-613510 Glycine max
Glyma.04G007900 0.5kb upstream 0.5kb upstream 500 false Chr04: 612373-612872 Glycine max
Glyma.04G007900 0.5kb downstream 0.5kb downstream 1138 true Chr04: 612873-614010 Glycine max
Glyma.04G007900 0.5kb downstream 0.5kb downstream 500 false Chr04: 613511-614010 Glycine max
Glyma.04G007900 1.0kb upstream 1.0kb upstream 1638 true Chr04: 611873-613510 Glycine max
Glyma.04G007900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 611873-612872 Glycine max
Glyma.04G007900 1.0kb downstream 1.0kb downstream 1638 true Chr04: 612873-614510 Glycine max
Glyma.04G007900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 613511-614510 Glycine max
Glyma.04G007900 2.0kb upstream 2.0kb upstream 2638 true Chr04: 610873-613510 Glycine max
Glyma.04G007900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 610873-612872 Glycine max
Glyma.04G007900 2.0kb downstream 2.0kb downstream 2638 true Chr04: 612873-615510 Glycine max
Glyma.04G007900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 613511-615510 Glycine max
Glyma.04G007900 5.0kb upstream 5.0kb upstream 5638 true Chr04: 607873-613510 Glycine max
Glyma.04G007900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 607873-612872 Glycine max
Glyma.04G007900 5.0kb downstream 5.0kb downstream 5638 true Chr04: 612873-618510 Glycine max
Glyma.04G007900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 613511-618510 Glycine max
Glyma.04G007900 10.0kb upstream 10.0kb upstream 10638 true Chr04: 602873-613510 Glycine max
Glyma.04G007900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 602873-612872 Glycine max
Glyma.04G007900 10.0kb downstream 10.0kb downstream 10638 true Chr04: 612873-623510 Glycine max
Glyma.04G007900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 613511-623510 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311837 5265 Fabidae View MSA
124068487 5270 Rosid View MSA
123752888 5271 Pentapetalae View MSA
122792825 5272 Eudicot View MSA
122046754 5273 Angiosperm View MSA
121345882 5274 Embryophyte View MSA
123380282 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.3478 0.0 38.0956    
cufflinks 12.0418 0.0 37.3504    
cufflinks 6.29849 0.0 21.3569   Low
cufflinks 7.66092 0.0 25.2714    
cufflinks 12.6241 0.0 38.6415    
cufflinks 6.54727 0.0 22.029   Low
cufflinks 13.703 0.0 41.4693   High
cufflinks 11.6603 0.0 36.2867    
cufflinks 10.9628 0.0 34.4385    
cufflinks 4.909        
cufflinks 1.37       Low
cufflinks 4.934        
cufflinks 5.367        
cufflinks 7.656     High High
cufflinks 2.096        
cufflinks 5.488        
cufflinks 2.633        
cufflinks 5.625        
cufflinks 5.72        
cufflinks 4.629        
cufflinks 1.838       Low
cufflinks 4.806        
cufflinks 5.125        
cufflinks 1.238       Low
cufflinks 4.561        
cufflinks 1.851       Low

0 Strain