Gene : Glyma.04G025400 G. max Wm82.a2.v1
Defline:  (1 of 3) KOG4687 - Uncharacterized coiled-coil protein Genomic Order:  254
Name:  ? Glyma.04G025400 Secondary Identifier:  ? PAC:30487422
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G025400 0.5kb upstream 0.5kb upstream 6504 true Chr04: 2044806-2051309 Glycine max
Glyma.04G025400 0.5kb upstream 0.5kb upstream 500 false Chr04: 2050810-2051309 Glycine max
Glyma.04G025400 0.5kb downstream 0.5kb downstream 6504 true Chr04: 2044306-2050809 Glycine max
Glyma.04G025400 0.5kb downstream 0.5kb downstream 500 false Chr04: 2044306-2044805 Glycine max
Glyma.04G025400 1.0kb upstream 1.0kb upstream 7004 true Chr04: 2044806-2051809 Glycine max
Glyma.04G025400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 2050810-2051809 Glycine max
Glyma.04G025400 1.0kb downstream 1.0kb downstream 7004 true Chr04: 2043806-2050809 Glycine max
Glyma.04G025400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 2043806-2044805 Glycine max
Glyma.04G025400 2.0kb upstream 2.0kb upstream 8004 true Chr04: 2044806-2052809 Glycine max
Glyma.04G025400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 2050810-2052809 Glycine max
Glyma.04G025400 2.0kb downstream 2.0kb downstream 8004 true Chr04: 2042806-2050809 Glycine max
Glyma.04G025400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 2042806-2044805 Glycine max
Glyma.04G025400 5.0kb upstream 5.0kb upstream 11004 true Chr04: 2044806-2055809 Glycine max
Glyma.04G025400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 2050810-2055809 Glycine max
Glyma.04G025400 5.0kb downstream 5.0kb downstream 11004 true Chr04: 2039806-2050809 Glycine max
Glyma.04G025400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 2039806-2044805 Glycine max
Glyma.04G025400 10.0kb upstream 10.0kb upstream 16004 true Chr04: 2044806-2060809 Glycine max
Glyma.04G025400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 2050810-2060809 Glycine max
Glyma.04G025400 10.0kb downstream 10.0kb downstream 16004 true Chr04: 2034806-2050809 Glycine max
Glyma.04G025400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 2034806-2044805 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311025 5265 Fabidae View MSA
124071208 5270 Rosid View MSA
123744049 5271 Pentapetalae View MSA
122790238 5272 Eudicot View MSA
122044251 5273 Angiosperm View MSA
121351576 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.07969 0.0 8.17099    
cufflinks 7.31838 0.0 24.5605    
cufflinks 1.58875 0.0 5.69472   Low
cufflinks 16.5435 0.0 61.941   High
cufflinks 4.13456 0.0 14.2666    
cufflinks 1.52538 0.0 5.5796   Low
cufflinks 8.42373 0.0 28.5226    
cufflinks 14.699 0.0 53.6838   High
cufflinks 5.19167 0.0 17.5882    
cufflinks 4.462       High
cufflinks 0.184       Low
cufflinks 1.721        
cufflinks 2.318        
cufflinks 1.875        
cufflinks 0.193       Low
cufflinks 2.7        
cufflinks 0.473        
cufflinks 3.857       High
cufflinks 2.552        
cufflinks 2.197        
cufflinks 0.635        
cufflinks 2.55        
cufflinks 3.29        
cufflinks 0.146       Low
cufflinks 2.147        
cufflinks 0.554        

0 Strain