Gene : Glyma.04G027200 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11945:SF219 - FLORAL HOMEOTIC PROTEIN APETALA 3 Genomic Order:  272
Name:  ? Glyma.04G027200 Secondary Identifier:  ? PAC:30490890
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G027200 0.5kb upstream 0.5kb upstream 4544 true Chr04: 2212804-2217347 Glycine max
Glyma.04G027200 0.5kb upstream 0.5kb upstream 500 false Chr04: 2216848-2217347 Glycine max
Glyma.04G027200 0.5kb downstream 0.5kb downstream 4544 true Chr04: 2212304-2216847 Glycine max
Glyma.04G027200 0.5kb downstream 0.5kb downstream 500 false Chr04: 2212304-2212803 Glycine max
Glyma.04G027200 1.0kb upstream 1.0kb upstream 5044 true Chr04: 2212804-2217847 Glycine max
Glyma.04G027200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 2216848-2217847 Glycine max
Glyma.04G027200 1.0kb downstream 1.0kb downstream 5044 true Chr04: 2211804-2216847 Glycine max
Glyma.04G027200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 2211804-2212803 Glycine max
Glyma.04G027200 2.0kb upstream 2.0kb upstream 6044 true Chr04: 2212804-2218847 Glycine max
Glyma.04G027200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 2216848-2218847 Glycine max
Glyma.04G027200 2.0kb downstream 2.0kb downstream 6044 true Chr04: 2210804-2216847 Glycine max
Glyma.04G027200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 2210804-2212803 Glycine max
Glyma.04G027200 5.0kb upstream 5.0kb upstream 9044 true Chr04: 2212804-2221847 Glycine max
Glyma.04G027200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 2216848-2221847 Glycine max
Glyma.04G027200 5.0kb downstream 5.0kb downstream 9044 true Chr04: 2207804-2216847 Glycine max
Glyma.04G027200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 2207804-2212803 Glycine max
Glyma.04G027200 10.0kb upstream 10.0kb upstream 14044 true Chr04: 2212804-2226847 Glycine max
Glyma.04G027200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 2216848-2226847 Glycine max
Glyma.04G027200 10.0kb downstream 10.0kb downstream 14044 true Chr04: 2202804-2216847 Glycine max
Glyma.04G027200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 2202804-2212803 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310470 5265 Fabidae View MSA
124071528 5270 Rosid View MSA
123747185 5271 Pentapetalae View MSA
122794431 5272 Eudicot View MSA
122047951 5273 Angiosperm View MSA
121310821 5274 Embryophyte View MSA
123348212 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.645127 0.0 2.40561    
cufflinks 0.0555737 0.0 0.230453 Low Low
cufflinks 226.82 0.0 768.796 High High
cufflinks 1.83846 0.0 6.40236    
cufflinks 0.240304 0.0 0.935839    
cufflinks 0.749199 0.0 2.77439    
cufflinks 1.74416 0.0 6.11223    
cufflinks 0.425066 0.0 1.61398    
cufflinks 0.0378268 0.0 0.161213 Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.02     Low  
cufflinks 41.515     High High
cufflinks 0.176        
cufflinks 0.108        
cufflinks 0.023     Low  
cufflinks 0.065     Low  
cufflinks 0.072        
cufflinks 36.867     High High
cufflinks 0.013     Low  
cufflinks 0.087     Low  
cufflinks 0.01     Low  
cufflinks 0.072     Low  
cufflinks 0.021     Low  
cufflinks 0.014     Low  
cufflinks 0.093     Low  
cufflinks 0.01     Low  

0 Strain