Gene : Glyma.04G194200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24096:SF251 - 4-COUMARATE--COA LIGASE-LIKE 9 Genomic Order:  1942
Name:  ? Glyma.04G194200 Secondary Identifier:  ? PAC:30490672
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G194200 0.5kb upstream 0.5kb upstream 14058 true Chr04: 46584101-46598158 Glycine max
Glyma.04G194200 0.5kb upstream 0.5kb upstream 500 false Chr04: 46597659-46598158 Glycine max
Glyma.04G194200 0.5kb downstream 0.5kb downstream 14058 true Chr04: 46583601-46597658 Glycine max
Glyma.04G194200 0.5kb downstream 0.5kb downstream 500 false Chr04: 46583601-46584100 Glycine max
Glyma.04G194200 1.0kb upstream 1.0kb upstream 14558 true Chr04: 46584101-46598658 Glycine max
Glyma.04G194200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 46597659-46598658 Glycine max
Glyma.04G194200 1.0kb downstream 1.0kb downstream 14558 true Chr04: 46583101-46597658 Glycine max
Glyma.04G194200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 46583101-46584100 Glycine max
Glyma.04G194200 2.0kb upstream 2.0kb upstream 15558 true Chr04: 46584101-46599658 Glycine max
Glyma.04G194200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 46597659-46599658 Glycine max
Glyma.04G194200 2.0kb downstream 2.0kb downstream 15558 true Chr04: 46582101-46597658 Glycine max
Glyma.04G194200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 46582101-46584100 Glycine max
Glyma.04G194200 5.0kb upstream 5.0kb upstream 18558 true Chr04: 46584101-46602658 Glycine max
Glyma.04G194200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 46597659-46602658 Glycine max
Glyma.04G194200 5.0kb downstream 5.0kb downstream 18558 true Chr04: 46579101-46597658 Glycine max
Glyma.04G194200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 46579101-46584100 Glycine max
Glyma.04G194200 10.0kb upstream 10.0kb upstream 23558 true Chr04: 46584101-46607658 Glycine max
Glyma.04G194200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 46597659-46607658 Glycine max
Glyma.04G194200 10.0kb downstream 10.0kb downstream 23558 true Chr04: 46574101-46597658 Glycine max
Glyma.04G194200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 46574101-46584100 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304727 5265 Fabidae View MSA
124071918 5270 Rosid View MSA
123745043 5271 Pentapetalae View MSA
122795708 5272 Eudicot View MSA
122045138 5273 Angiosperm View MSA
121310405 5274 Embryophyte View MSA
123347895 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.658 0.0 56.8995   High
cufflinks 4.98291 0.0 25.7295    
cufflinks 3.10171 0.0 17.2093    
cufflinks 8.43344 0.0 38.4948   High
cufflinks 1.92146 0.0 11.2381    
cufflinks 1.10255 0.0 8.1982   Low
cufflinks 4.64756 0.0 24.3459    
cufflinks 5.65814 0.0 26.4495    
cufflinks 2.54117 0.0 15.7388    
cufflinks 0.077     Low  
cufflinks 0.006     Low Low
cufflinks 0.067     Low  
cufflinks 0.011     Low  
cufflinks 0.006     Low Low
cufflinks 0.004     Low Low
cufflinks 0.073     Low  
cufflinks 0.062     Low  
cufflinks 0.086     Low  
cufflinks 0.137       High
cufflinks 0.116        
cufflinks 0.009     Low Low
cufflinks 0.138       High
cufflinks 0.197       High
cufflinks 0.009     Low Low
cufflinks 0.089     Low  
cufflinks 0.017     Low  

0 Strain