Gene : Glyma.04G187600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10629//PTHR10629:SF36 - CYTOSINE-SPECIFIC METHYLTRANSFERASE Genomic Order:  1876
Name:  ? Glyma.04G187600 Secondary Identifier:  ? PAC:30488304
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G187600 0.5kb upstream 0.5kb upstream 8403 true Chr04: 45834633-45843035 Glycine max
Glyma.04G187600 0.5kb upstream 0.5kb upstream 500 false Chr04: 45842536-45843035 Glycine max
Glyma.04G187600 0.5kb downstream 0.5kb downstream 8403 true Chr04: 45834133-45842535 Glycine max
Glyma.04G187600 0.5kb downstream 0.5kb downstream 500 false Chr04: 45834133-45834632 Glycine max
Glyma.04G187600 1.0kb upstream 1.0kb upstream 8903 true Chr04: 45834633-45843535 Glycine max
Glyma.04G187600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 45842536-45843535 Glycine max
Glyma.04G187600 1.0kb downstream 1.0kb downstream 8903 true Chr04: 45833633-45842535 Glycine max
Glyma.04G187600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 45833633-45834632 Glycine max
Glyma.04G187600 2.0kb upstream 2.0kb upstream 9903 true Chr04: 45834633-45844535 Glycine max
Glyma.04G187600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 45842536-45844535 Glycine max
Glyma.04G187600 2.0kb downstream 2.0kb downstream 9903 true Chr04: 45832633-45842535 Glycine max
Glyma.04G187600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 45832633-45834632 Glycine max
Glyma.04G187600 5.0kb upstream 5.0kb upstream 12903 true Chr04: 45834633-45847535 Glycine max
Glyma.04G187600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 45842536-45847535 Glycine max
Glyma.04G187600 5.0kb downstream 5.0kb downstream 12903 true Chr04: 45829633-45842535 Glycine max
Glyma.04G187600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 45829633-45834632 Glycine max
Glyma.04G187600 10.0kb upstream 10.0kb upstream 17903 true Chr04: 45834633-45852535 Glycine max
Glyma.04G187600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 45842536-45852535 Glycine max
Glyma.04G187600 10.0kb downstream 10.0kb downstream 17903 true Chr04: 45824633-45842535 Glycine max
Glyma.04G187600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 45824633-45834632 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299671 5265 Fabidae View MSA
124066065 5270 Rosid View MSA
123746756 5271 Pentapetalae View MSA
122791614 5272 Eudicot View MSA
122044527 5273 Angiosperm View MSA
121344119 5274 Embryophyte View MSA
123428443 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.286006 0.0 1.25037   Low
cufflinks 4.95192 0.0 19.8316   High
cufflinks 0.789302 0.0 2.58752    
cufflinks 1.61579 0.0 5.60463    
cufflinks 3.49559 0.0 10.6069    
cufflinks 1.47725 0.0 5.22645    
cufflinks 1.18928 0.0 5.38245    
cufflinks 1.46901 0.0 5.21305    
cufflinks 3.53062 0.0 10.7116    
cufflinks 0.748        
cufflinks 0.135       Low
cufflinks 0.633        
cufflinks 1.8       High
cufflinks 2.262       High
cufflinks 0.127       Low
cufflinks 0.979        
cufflinks 0.273        
cufflinks 0.45        
cufflinks 2.703       High
cufflinks 0.67        
cufflinks 0.175       Low
cufflinks 0.84        
cufflinks 2.483       High
cufflinks 0.212       Low
cufflinks 0.739        
cufflinks 0.345        

0 Strain