Gene : Glyma.04G203300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11638:SF118 - CHAPERONE PROTEIN CLPD, CHLOROPLASTIC Genomic Order:  2033
Name:  ? Glyma.04G203300 Secondary Identifier:  ? PAC:30490942
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G203300 0.5kb upstream 0.5kb upstream 7927 true Chr04: 47601624-47609550 Glycine max
Glyma.04G203300 0.5kb upstream 0.5kb upstream 500 false Chr04: 47601624-47602123 Glycine max
Glyma.04G203300 0.5kb downstream 0.5kb downstream 7927 true Chr04: 47602124-47610050 Glycine max
Glyma.04G203300 0.5kb downstream 0.5kb downstream 500 false Chr04: 47609551-47610050 Glycine max
Glyma.04G203300 1.0kb upstream 1.0kb upstream 8427 true Chr04: 47601124-47609550 Glycine max
Glyma.04G203300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 47601124-47602123 Glycine max
Glyma.04G203300 1.0kb downstream 1.0kb downstream 8427 true Chr04: 47602124-47610550 Glycine max
Glyma.04G203300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 47609551-47610550 Glycine max
Glyma.04G203300 2.0kb upstream 2.0kb upstream 9427 true Chr04: 47600124-47609550 Glycine max
Glyma.04G203300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 47600124-47602123 Glycine max
Glyma.04G203300 2.0kb downstream 2.0kb downstream 9427 true Chr04: 47602124-47611550 Glycine max
Glyma.04G203300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 47609551-47611550 Glycine max
Glyma.04G203300 5.0kb upstream 5.0kb upstream 12427 true Chr04: 47597124-47609550 Glycine max
Glyma.04G203300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 47597124-47602123 Glycine max
Glyma.04G203300 5.0kb downstream 5.0kb downstream 12427 true Chr04: 47602124-47614550 Glycine max
Glyma.04G203300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 47609551-47614550 Glycine max
Glyma.04G203300 10.0kb upstream 10.0kb upstream 17427 true Chr04: 47592124-47609550 Glycine max
Glyma.04G203300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 47592124-47602123 Glycine max
Glyma.04G203300 10.0kb downstream 10.0kb downstream 17427 true Chr04: 47602124-47619550 Glycine max
Glyma.04G203300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 47609551-47619550 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041323 5273 Angiosperm View MSA
122299430 5265 Fabidae View MSA
124066848 5270 Rosid View MSA
123740697 5271 Pentapetalae View MSA
122787992 5272 Eudicot View MSA
121345985 5274 Embryophyte View MSA
123426532 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.92 0.0 99.0446 High High
cufflinks 2.70231 0.0 7.79921    
cufflinks 30.5714 0.0 88.2825 High High
cufflinks 1.1368 0.0 3.69334   Low
cufflinks 3.82454 0.0 10.6249    
cufflinks 4.52144 0.0 12.388    
cufflinks 1.7328 0.0 5.30819   Low
cufflinks 10.0456 0.0 26.8064    
cufflinks 6.1713 0.0 16.6104    
cufflinks 3.811        
cufflinks 10.644     High High
cufflinks 8.832     High High
cufflinks 1.438       Low
cufflinks 1.086       Low
cufflinks 8.021     High High
cufflinks 1.928        
cufflinks 5.622        
cufflinks 2.865        
cufflinks 1.688        
cufflinks 1.787        
cufflinks 6.866     High  
cufflinks 2.973        
cufflinks 3.066        
cufflinks 12.455     High High
cufflinks 1.862        
cufflinks 3.685        

0 Strain