Gene : Glyma.04G211000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10857//PTHR10857:SF18 - COPINE Genomic Order:  2110
Name:  ? Glyma.04G211000 Secondary Identifier:  ? PAC:30487674
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G211000 0.5kb upstream 0.5kb upstream 9075 true Chr04: 48278435-48287509 Glycine max
Glyma.04G211000 0.5kb upstream 0.5kb upstream 500 false Chr04: 48287010-48287509 Glycine max
Glyma.04G211000 0.5kb downstream 0.5kb downstream 9075 true Chr04: 48277935-48287009 Glycine max
Glyma.04G211000 0.5kb downstream 0.5kb downstream 500 false Chr04: 48277935-48278434 Glycine max
Glyma.04G211000 1.0kb upstream 1.0kb upstream 9575 true Chr04: 48278435-48288009 Glycine max
Glyma.04G211000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 48287010-48288009 Glycine max
Glyma.04G211000 1.0kb downstream 1.0kb downstream 9575 true Chr04: 48277435-48287009 Glycine max
Glyma.04G211000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 48277435-48278434 Glycine max
Glyma.04G211000 2.0kb upstream 2.0kb upstream 10575 true Chr04: 48278435-48289009 Glycine max
Glyma.04G211000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 48287010-48289009 Glycine max
Glyma.04G211000 2.0kb downstream 2.0kb downstream 10575 true Chr04: 48276435-48287009 Glycine max
Glyma.04G211000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 48276435-48278434 Glycine max
Glyma.04G211000 5.0kb upstream 5.0kb upstream 13575 true Chr04: 48278435-48292009 Glycine max
Glyma.04G211000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 48287010-48292009 Glycine max
Glyma.04G211000 5.0kb downstream 5.0kb downstream 13575 true Chr04: 48273435-48287009 Glycine max
Glyma.04G211000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 48273435-48278434 Glycine max
Glyma.04G211000 10.0kb upstream 10.0kb upstream 18575 true Chr04: 48278435-48297009 Glycine max
Glyma.04G211000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 48287010-48297009 Glycine max
Glyma.04G211000 10.0kb downstream 10.0kb downstream 18575 true Chr04: 48268435-48287009 Glycine max
Glyma.04G211000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 48268435-48278434 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314443 5265 Fabidae View MSA
124066456 5270 Rosid View MSA
123739278 5271 Pentapetalae View MSA
122792027 5272 Eudicot View MSA
122050379 5273 Angiosperm View MSA
121350791 5274 Embryophyte View MSA
123424237 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.3631 0.0 70.7251    
cufflinks 8.49585 0.0 40.1601    
cufflinks 27.7697 0.0 118.184 High High
cufflinks 10.304 0.0 46.9343    
cufflinks 9.61289 0.0 39.9595    
cufflinks 20.0869 0.0 90.5714   High
cufflinks 4.31588 0.0 22.9064   Low
cufflinks 8.84675 0.0 37.4206    
cufflinks 11.7645 0.0 50.9466    
cufflinks 0.394        
cufflinks 1.654       High
cufflinks 0.716        
cufflinks 0.574        
cufflinks 0.314       Low
cufflinks 0.941        
cufflinks 0.477        
cufflinks 0.737        
cufflinks 0.306       Low
cufflinks 0.359       Low
cufflinks 0.468        
cufflinks 1.212       High
cufflinks 0.506        
cufflinks 0.442        
cufflinks 1.696       High
cufflinks 0.466        
cufflinks 1.108       High

0 Strain