Protein Family : RING domain ligase2 123424237

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  388

388 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29770.t000011 (1 of 1) PTHR10857//PTHR10857:SF47 - COPINE // SUBFAMILY NOT NAMED R. communis v0.1 1891   29770: 290958-292848
29836.t000023 (1 of 2) PTHR10857:SF34 - COPINE (CALCIUM-DEPENDENT PHOSPHOLIPID-BINDING PROTEIN) FAMILY PROTEIN R. communis v0.1 2715   29836: 294964-297678
29929.t000298 (1 of 2) PTHR10857:SF34 - COPINE (CALCIUM-DEPENDENT PHOSPHOLIPID-BINDING PROTEIN) FAMILY PROTEIN R. communis v0.1 3820   29929: 1700910-1704729
29992.t000018 (1 of 1) PTHR10857//PTHR10857:SF18 - COPINE // SUBFAMILY NOT NAMED R. communis v0.1 4616   29992: 555747-560362
30147.t000110 (1 of 2) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED R. communis v0.1 3259   30147: 2880508-2883766
29633.t000054 (1 of 2) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED R. communis v0.1 3749   29633: 333506-337254
Cucsa.011120 (1 of 3) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED C. sativus v1.0 5990   scaffold00154: 436737-442726
Cucsa.118640 (1 of 1) PTHR10857//PTHR10857:SF47 - COPINE C. sativus v1.0 8843   scaffold00998: 529647-538489
Cucsa.196380 (1 of 3) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED C. sativus v1.0 3686   scaffold01357: 78302-81987
Cucsa.286760 (1 of 2) PTHR10857:SF34 - COPINE (CALCIUM-DEPENDENT PHOSPHOLIPID-BINDING PROTEIN) FAMILY PROTEIN C. sativus v1.0 3482   scaffold02653: 2740539-2744020
orange1.1g012303m.g (1 of 1) PTHR10857:SF34 - COPINE (CALCIUM-DEPENDENT PHOSPHOLIPID-BINDING PROTEIN) FAMILY PROTEIN C. sinensis v1.1 4291   scaffold00020: 380946-385236
orange1.1g042398m.g (1 of 2) PTHR10857//PTHR10857:SF47 - COPINE C. sinensis v1.1 4362   scaffold00052: 177223-181584
orange1.1g015418m.g (1 of 2) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED C. sinensis v1.1 5177   scaffold00252: 103591-108767
orange1.1g013900m.g (1 of 1) PTHR10857//PTHR10857:SF18 - COPINE C. sinensis v1.1 5678   scaffold00179: 212990-218667
orange1.1g042752m.g (1 of 2) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED C. sinensis v1.1 3587   scaffold00003: 1165415-1169001
AT5G14420 (1 of 2) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED A. thaliana TAIR10 RGLG2 3199   Chr5: 4648111-4651309
AT5G63970 (1 of 1) PTHR10857//PTHR10857:SF18 - COPINE // SUBFAMILY NOT NAMED A. thaliana TAIR10 2477   Chr5: 25606771-25609247
AT3G01650 (1 of 2) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED A. thaliana TAIR10 RGLG1 3258   Chr3: 242011-245268
AT1G67800 (1 of 1) PTHR10857:SF34 - COPINE (CALCIUM-DEPENDENT PHOSPHOLIPID-BINDING PROTEIN) FAMILY PROTEIN A. thaliana TAIR10 2952   Chr1: 25420780-25423731
AT1G79380 (1 of 1) PTHR10857//PTHR10857:SF47 - COPINE // SUBFAMILY NOT NAMED A. thaliana TAIR10 2826   Chr1: 29860491-29863316
Thhalv10020651m.g (1 of 2) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED E. salsugineum v1.0 3168   scaffold_13: 9326377-9329544
Thhalv10013466m.g (1 of 2) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED E. salsugineum v1.0 3217   scaffold_2: 4715506-4718722
Thhalv10007950m.g (1 of 2) PTHR10857:SF34 - COPINE (CALCIUM-DEPENDENT PHOSPHOLIPID-BINDING PROTEIN) FAMILY PROTEIN E. salsugineum v1.0 2084   scaffold_5: 5990724-5992807
Thhalv10004448m.g (1 of 1) PTHR10857//PTHR10857:SF18 - COPINE E. salsugineum v1.0 2522   scaffold_6: 1447755-1450276
Thhalv10018670m.g (1 of 1) PTHR10857//PTHR10857:SF47 - COPINE E. salsugineum v1.0 2835   scaffold_9: 620236-623070
Thhalv10019546m.g (1 of 2) PTHR10857:SF34 - COPINE (CALCIUM-DEPENDENT PHOSPHOLIPID-BINDING PROTEIN) FAMILY PROTEIN E. salsugineum v1.0 2253   scaffold_9: 6227433-6229685
Ciclev10001203m.g (1 of 1) PTHR10857//PTHR10857:SF18 - COPINE C. clementina v1.0 6096   scaffold_5: 16526797-16532892
Ciclev10020205m.g (1 of 2) PTHR10857:SF34 - COPINE (CALCIUM-DEPENDENT PHOSPHOLIPID-BINDING PROTEIN) FAMILY PROTEIN C. clementina v1.0 4273   scaffold_3: 3767475-3771747
Ciclev10015247m.g (1 of 1) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED C. clementina v1.0 4970   scaffold_2: 10050552-10055521
Ciclev10031509m.g (1 of 2) PTHR10857:SF34 - COPINE (CALCIUM-DEPENDENT PHOSPHOLIPID-BINDING PROTEIN) FAMILY PROTEIN C. clementina v1.0 4817   scaffold_4: 22007451-22012267

388 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29770.m000343 R. communis v0.1 123424237 RING domain ligase2 6 5275 Viridiplantae
29836.m000576 R. communis v0.1 123424237 RING domain ligase2 6 5275 Viridiplantae
29929.m004795 R. communis v0.1 123424237 RING domain ligase2 6 5275 Viridiplantae
29992.m001423 R. communis v0.1 123424237 RING domain ligase2 6 5275 Viridiplantae
30147.m013839 R. communis v0.1 123424237 RING domain ligase2 6 5275 Viridiplantae
29633.m000935 R. communis v0.1 123424237 RING domain ligase2 6 5275 Viridiplantae
Cucsa.118640.1 C. sativus v1.0 123424237 RING domain ligase2 4 5275 Viridiplantae
Cucsa.196380.1 C. sativus v1.0 123424237 RING domain ligase2 4 5275 Viridiplantae
Cucsa.286760.1 C. sativus v1.0 123424237 RING domain ligase2 4 5275 Viridiplantae
Cucsa.011120.1 C. sativus v1.0 123424237 RING domain ligase2 4 5275 Viridiplantae
orange1.1g015418m C. sinensis v1.1 123424237 RING domain ligase2 5 5275 Viridiplantae
orange1.1g042398m C. sinensis v1.1 123424237 RING domain ligase2 5 5275 Viridiplantae
orange1.1g012303m C. sinensis v1.1 123424237 RING domain ligase2 5 5275 Viridiplantae
orange1.1g042752m C. sinensis v1.1 123424237 RING domain ligase2 5 5275 Viridiplantae
orange1.1g013900m C. sinensis v1.1 123424237 RING domain ligase2 5 5275 Viridiplantae
AT3G01650.1 A. thaliana TAIR10 123424237 RING domain ligase2 5 5275 Viridiplantae
AT1G67800.2 A. thaliana TAIR10 123424237 RING domain ligase2 5 5275 Viridiplantae
AT5G14420.1 A. thaliana TAIR10 123424237 RING domain ligase2 5 5275 Viridiplantae
AT5G63970.1 A. thaliana TAIR10 123424237 RING domain ligase2 5 5275 Viridiplantae
AT1G79380.1 A. thaliana TAIR10 123424237 RING domain ligase2 5 5275 Viridiplantae
Thhalv10019546m E. salsugineum v1.0 123424237 RING domain ligase2 6 5275 Viridiplantae
Thhalv10013466m E. salsugineum v1.0 123424237 RING domain ligase2 6 5275 Viridiplantae
Thhalv10020651m E. salsugineum v1.0 123424237 RING domain ligase2 6 5275 Viridiplantae
Thhalv10018670m E. salsugineum v1.0 123424237 RING domain ligase2 6 5275 Viridiplantae
Thhalv10007950m E. salsugineum v1.0 123424237 RING domain ligase2 6 5275 Viridiplantae
Thhalv10004448m E. salsugineum v1.0 123424237 RING domain ligase2 6 5275 Viridiplantae
Ciclev10031509m C. clementina v1.0 123424237 RING domain ligase2 5 5275 Viridiplantae
Ciclev10001203m C. clementina v1.0 123424237 RING domain ligase2 5 5275 Viridiplantae
Ciclev10020205m C. clementina v1.0 123424237 RING domain ligase2 5 5275 Viridiplantae
Ciclev10015247m C. clementina v1.0 123424237 RING domain ligase2 5 5275 Viridiplantae