Gene : AT5G63970 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10857//PTHR10857:SF18 - COPINE // SUBFAMILY NOT NAMED Genomic Order:  5913
Name:  ? AT5G63970 Secondary Identifier:  ? PAC:19672583
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G63970 0.5kb upstream 0.5kb upstream 2977 true Chr5: 25606771-25609747 Arabidopsis thaliana
AT5G63970 0.5kb upstream 0.5kb upstream 500 false Chr5: 25609248-25609747 Arabidopsis thaliana
AT5G63970 0.5kb downstream 0.5kb downstream 2977 true Chr5: 25606271-25609247 Arabidopsis thaliana
AT5G63970 0.5kb downstream 0.5kb downstream 500 false Chr5: 25606271-25606770 Arabidopsis thaliana
AT5G63970 1.0kb upstream 1.0kb upstream 3477 true Chr5: 25606771-25610247 Arabidopsis thaliana
AT5G63970 1.0kb upstream 1.0kb upstream 1000 false Chr5: 25609248-25610247 Arabidopsis thaliana
AT5G63970 1.0kb downstream 1.0kb downstream 3477 true Chr5: 25605771-25609247 Arabidopsis thaliana
AT5G63970 1.0kb downstream 1.0kb downstream 1000 false Chr5: 25605771-25606770 Arabidopsis thaliana
AT5G63970 2.0kb upstream 2.0kb upstream 4477 true Chr5: 25606771-25611247 Arabidopsis thaliana
AT5G63970 2.0kb upstream 2.0kb upstream 2000 false Chr5: 25609248-25611247 Arabidopsis thaliana
AT5G63970 2.0kb downstream 2.0kb downstream 4477 true Chr5: 25604771-25609247 Arabidopsis thaliana
AT5G63970 2.0kb downstream 2.0kb downstream 2000 false Chr5: 25604771-25606770 Arabidopsis thaliana
AT5G63970 5.0kb upstream 5.0kb upstream 7477 true Chr5: 25606771-25614247 Arabidopsis thaliana
AT5G63970 5.0kb upstream 5.0kb upstream 5000 false Chr5: 25609248-25614247 Arabidopsis thaliana
AT5G63970 5.0kb downstream 5.0kb downstream 7477 true Chr5: 25601771-25609247 Arabidopsis thaliana
AT5G63970 5.0kb downstream 5.0kb downstream 5000 false Chr5: 25601771-25606770 Arabidopsis thaliana
AT5G63970 10.0kb upstream 10.0kb upstream 12477 true Chr5: 25606771-25619247 Arabidopsis thaliana
AT5G63970 10.0kb upstream 10.0kb upstream 10000 false Chr5: 25609248-25619247 Arabidopsis thaliana
AT5G63970 10.0kb downstream 10.0kb downstream 12477 true Chr5: 25596771-25609247 Arabidopsis thaliana
AT5G63970 10.0kb downstream 10.0kb downstream 10000 false Chr5: 25596771-25606770 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375445 5261 Brassicaceae View MSA
123833694 5264 Brassicales-Malvales View MSA
124344728 5266 SBM View MSA
124239338 5268 Malvidae View MSA
124066456 5270 Rosid View MSA
123739278 5271 Pentapetalae View MSA
122792027 5272 Eudicot View MSA
122050379 5273 Angiosperm View MSA
121350791 5274 Embryophyte View MSA
123424237 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.734       Low
cufflinks 11.602        
cufflinks 3.088        
cufflinks 14.062       High
cufflinks 4.075        
cufflinks 9.283        

0 Strain