Gene : Glyma.04G233300 G. max Wm82.a2.v1
Defline:  (1 of 79) PF02701 - Dof domain, zinc finger (zf-Dof) Genomic Order:  2333
Name:  ? Glyma.04G233300 Secondary Identifier:  ? PAC:30488089
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G233300 0.5kb upstream 0.5kb upstream 2415 true Chr04: 50157910-50160324 Glycine max
Glyma.04G233300 0.5kb upstream 0.5kb upstream 500 false Chr04: 50159825-50160324 Glycine max
Glyma.04G233300 0.5kb downstream 0.5kb downstream 2415 true Chr04: 50157410-50159824 Glycine max
Glyma.04G233300 0.5kb downstream 0.5kb downstream 500 false Chr04: 50157410-50157909 Glycine max
Glyma.04G233300 1.0kb upstream 1.0kb upstream 2915 true Chr04: 50157910-50160824 Glycine max
Glyma.04G233300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 50159825-50160824 Glycine max
Glyma.04G233300 1.0kb downstream 1.0kb downstream 2915 true Chr04: 50156910-50159824 Glycine max
Glyma.04G233300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 50156910-50157909 Glycine max
Glyma.04G233300 2.0kb upstream 2.0kb upstream 3915 true Chr04: 50157910-50161824 Glycine max
Glyma.04G233300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 50159825-50161824 Glycine max
Glyma.04G233300 2.0kb downstream 2.0kb downstream 3915 true Chr04: 50155910-50159824 Glycine max
Glyma.04G233300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 50155910-50157909 Glycine max
Glyma.04G233300 5.0kb upstream 5.0kb upstream 6915 true Chr04: 50157910-50164824 Glycine max
Glyma.04G233300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 50159825-50164824 Glycine max
Glyma.04G233300 5.0kb downstream 5.0kb downstream 6915 true Chr04: 50152910-50159824 Glycine max
Glyma.04G233300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 50152910-50157909 Glycine max
Glyma.04G233300 10.0kb upstream 10.0kb upstream 11915 true Chr04: 50157910-50169824 Glycine max
Glyma.04G233300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 50159825-50169824 Glycine max
Glyma.04G233300 10.0kb downstream 10.0kb downstream 11915 true Chr04: 50147910-50159824 Glycine max
Glyma.04G233300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 50147910-50157909 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301087 5265 Fabidae View MSA
124070858 5270 Rosid View MSA
123748434 5271 Pentapetalae View MSA
122796456 5272 Eudicot View MSA
122050733 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.28751 0.0 18.9034    
cufflinks 5.45609 0.0 22.6972    
cufflinks 4.59083 0.0 23.1313    
cufflinks 7.68162 0.0 33.2574    
cufflinks 7.77883 0.0 33.9731    
cufflinks 1.61841 0.0 8.56725   Low
cufflinks 1.75495 0.0 10.6254   Low
cufflinks 16.1705 0.0 54.6005   High
cufflinks 7.61656 0.0 28.7483    
cufflinks 6.92       High
cufflinks 1.265        
cufflinks 1.559        
cufflinks 2.249        
cufflinks 0.877        
cufflinks 0.806        
cufflinks 0.78        
cufflinks 8.749     High High
cufflinks 1.7        
cufflinks 0.799        
cufflinks 0.628        
cufflinks 1.234        
cufflinks 0.827        
cufflinks 0.835        
cufflinks 0.927        
cufflinks 0.625        
cufflinks 1.908        

0 Strain