Gene : Glyma.04G234400 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR33868:SF2 - EXPRESSED PROTEIN Genomic Order:  2344
Name:  ? Glyma.04G234400 Secondary Identifier:  ? PAC:30491006
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G234400 0.5kb upstream 0.5kb upstream 4871 true Chr04: 50285530-50290400 Glycine max
Glyma.04G234400 0.5kb upstream 0.5kb upstream 500 false Chr04: 50285530-50286029 Glycine max
Glyma.04G234400 0.5kb downstream 0.5kb downstream 4871 true Chr04: 50286030-50290900 Glycine max
Glyma.04G234400 0.5kb downstream 0.5kb downstream 500 false Chr04: 50290401-50290900 Glycine max
Glyma.04G234400 1.0kb upstream 1.0kb upstream 5371 true Chr04: 50285030-50290400 Glycine max
Glyma.04G234400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 50285030-50286029 Glycine max
Glyma.04G234400 1.0kb downstream 1.0kb downstream 5371 true Chr04: 50286030-50291400 Glycine max
Glyma.04G234400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 50290401-50291400 Glycine max
Glyma.04G234400 2.0kb upstream 2.0kb upstream 6371 true Chr04: 50284030-50290400 Glycine max
Glyma.04G234400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 50284030-50286029 Glycine max
Glyma.04G234400 2.0kb downstream 2.0kb downstream 6371 true Chr04: 50286030-50292400 Glycine max
Glyma.04G234400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 50290401-50292400 Glycine max
Glyma.04G234400 5.0kb upstream 5.0kb upstream 9371 true Chr04: 50281030-50290400 Glycine max
Glyma.04G234400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 50281030-50286029 Glycine max
Glyma.04G234400 5.0kb downstream 5.0kb downstream 9371 true Chr04: 50286030-50295400 Glycine max
Glyma.04G234400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 50290401-50295400 Glycine max
Glyma.04G234400 10.0kb upstream 10.0kb upstream 14371 true Chr04: 50276030-50290400 Glycine max
Glyma.04G234400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 50276030-50286029 Glycine max
Glyma.04G234400 10.0kb downstream 10.0kb downstream 14371 true Chr04: 50286030-50300400 Glycine max
Glyma.04G234400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 50290401-50300400 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301867 5265 Fabidae View MSA
124070490 5270 Rosid View MSA
123747466 5271 Pentapetalae View MSA
122788794 5272 Eudicot View MSA
122043778 5273 Angiosperm View MSA
121348592 5274 Embryophyte View MSA
123380930 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.54985 0.0 30.754    
cufflinks 3.7295 0.0 17.8632    
cufflinks 41.0715 0.0 179.529 High High
cufflinks 3.76283 0.0 15.8695    
cufflinks 5.07659 0.0 24.2576    
cufflinks 15.9683 0.0 54.0969   High
cufflinks 6.14774 0.0 23.5753    
cufflinks 5.26911 0.0 22.6849    
cufflinks 2.65487 0.0 14.3103   Low
cufflinks 1.166        
cufflinks 0.466        
cufflinks 2.311       High
cufflinks 0.842        
cufflinks 0.268        
cufflinks 0.093       Low
cufflinks 0.368        
cufflinks 2.697       High
cufflinks 0.686        
cufflinks 0.46        
cufflinks 0.309        
cufflinks 0.327        
cufflinks 0.448        
cufflinks 0.524        
cufflinks 0.755        
cufflinks 0.282        
cufflinks 1.019        

0 Strain