Gene : Glyma.04G214100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12565:SF125 - TRANSCRIPTION FACTOR HEC3-RELATED Genomic Order:  2141
Name:  ? Glyma.04G214100 Secondary Identifier:  ? PAC:30488158
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G214100 0.5kb upstream 0.5kb upstream 1232 true Chr04: 48576689-48577920 Glycine max
Glyma.04G214100 0.5kb upstream 0.5kb upstream 500 false Chr04: 48577421-48577920 Glycine max
Glyma.04G214100 0.5kb downstream 0.5kb downstream 1232 true Chr04: 48576189-48577420 Glycine max
Glyma.04G214100 0.5kb downstream 0.5kb downstream 500 false Chr04: 48576189-48576688 Glycine max
Glyma.04G214100 1.0kb upstream 1.0kb upstream 1732 true Chr04: 48576689-48578420 Glycine max
Glyma.04G214100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 48577421-48578420 Glycine max
Glyma.04G214100 1.0kb downstream 1.0kb downstream 1732 true Chr04: 48575689-48577420 Glycine max
Glyma.04G214100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 48575689-48576688 Glycine max
Glyma.04G214100 2.0kb upstream 2.0kb upstream 2732 true Chr04: 48576689-48579420 Glycine max
Glyma.04G214100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 48577421-48579420 Glycine max
Glyma.04G214100 2.0kb downstream 2.0kb downstream 2732 true Chr04: 48574689-48577420 Glycine max
Glyma.04G214100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 48574689-48576688 Glycine max
Glyma.04G214100 5.0kb upstream 5.0kb upstream 5732 true Chr04: 48576689-48582420 Glycine max
Glyma.04G214100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 48577421-48582420 Glycine max
Glyma.04G214100 5.0kb downstream 5.0kb downstream 5732 true Chr04: 48571689-48577420 Glycine max
Glyma.04G214100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 48571689-48576688 Glycine max
Glyma.04G214100 10.0kb upstream 10.0kb upstream 10732 true Chr04: 48576689-48587420 Glycine max
Glyma.04G214100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 48577421-48587420 Glycine max
Glyma.04G214100 10.0kb downstream 10.0kb downstream 10732 true Chr04: 48566689-48577420 Glycine max
Glyma.04G214100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 48566689-48576688 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255372 5265 Fabidae View MSA
124065698 5270 Rosid View MSA
123745456 5271 Pentapetalae View MSA
122795730 5272 Eudicot View MSA
122049789 5273 Angiosperm View MSA
121351233 5274 Embryophyte View MSA
123382070 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.136751 0.0 0.554384 Low  
cufflinks 0.13156 0.0 0.533793 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0579923 0.0 0.248527 Low Low
cufflinks 0.0796444 0.0 0.332562 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.129        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.436        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain