Gene : Glyma.19G176200 G. max Wm82.a2.v1
Defline:  (1 of 15) PF00076//PF00098 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zinc knuckle (zf-CCHC) Genomic Order:  1762
Name:  ? Glyma.19G176200 Secondary Identifier:  ? PAC:30513679
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G176200 0.5kb upstream 0.5kb upstream 4050 true Chr19: 43610509-43614558 Glycine max
Glyma.19G176200 0.5kb upstream 0.5kb upstream 500 false Chr19: 43610509-43611008 Glycine max
Glyma.19G176200 0.5kb downstream 0.5kb downstream 4050 true Chr19: 43611009-43615058 Glycine max
Glyma.19G176200 0.5kb downstream 0.5kb downstream 500 false Chr19: 43614559-43615058 Glycine max
Glyma.19G176200 1.0kb upstream 1.0kb upstream 4550 true Chr19: 43610009-43614558 Glycine max
Glyma.19G176200 1.0kb upstream 1.0kb upstream 1000 false Chr19: 43610009-43611008 Glycine max
Glyma.19G176200 1.0kb downstream 1.0kb downstream 4550 true Chr19: 43611009-43615558 Glycine max
Glyma.19G176200 1.0kb downstream 1.0kb downstream 1000 false Chr19: 43614559-43615558 Glycine max
Glyma.19G176200 2.0kb upstream 2.0kb upstream 5550 true Chr19: 43609009-43614558 Glycine max
Glyma.19G176200 2.0kb upstream 2.0kb upstream 2000 false Chr19: 43609009-43611008 Glycine max
Glyma.19G176200 2.0kb downstream 2.0kb downstream 5550 true Chr19: 43611009-43616558 Glycine max
Glyma.19G176200 2.0kb downstream 2.0kb downstream 2000 false Chr19: 43614559-43616558 Glycine max
Glyma.19G176200 5.0kb upstream 5.0kb upstream 8550 true Chr19: 43606009-43614558 Glycine max
Glyma.19G176200 5.0kb upstream 5.0kb upstream 5000 false Chr19: 43606009-43611008 Glycine max
Glyma.19G176200 5.0kb downstream 5.0kb downstream 8550 true Chr19: 43611009-43619558 Glycine max
Glyma.19G176200 5.0kb downstream 5.0kb downstream 5000 false Chr19: 43614559-43619558 Glycine max
Glyma.19G176200 10.0kb upstream 10.0kb upstream 13550 true Chr19: 43601009-43614558 Glycine max
Glyma.19G176200 10.0kb upstream 10.0kb upstream 10000 false Chr19: 43601009-43611008 Glycine max
Glyma.19G176200 10.0kb downstream 10.0kb downstream 13550 true Chr19: 43611009-43624558 Glycine max
Glyma.19G176200 10.0kb downstream 10.0kb downstream 10000 false Chr19: 43614559-43624558 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314387 5265 Fabidae View MSA
124062846 5270 Rosid View MSA
123750776 5271 Pentapetalae View MSA
122794674 5272 Eudicot View MSA
122050337 5273 Angiosperm View MSA
121345725 5274 Embryophyte View MSA
123428073 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.2859 0.0 107.397 High  
cufflinks 22.3311 0.0 83.3442 High  
cufflinks 29.7792 0.0 121.801 High High
cufflinks 15.5867 0.0 69.0549    
cufflinks 15.3642 0.0 57.653    
cufflinks 15.883 0.0 54.1115    
cufflinks 21.9163 0.0 87.1798 High  
cufflinks 19.435 0.0 79.2543    
cufflinks 12.9513 0.0 49.573   Low
cufflinks 1.316       Low
cufflinks 2.127        
cufflinks 2.071        
cufflinks 1.411       Low
cufflinks 1.458       Low
cufflinks 1.737        
cufflinks 2.823       High
cufflinks 1.529       Low
cufflinks 1.66        
cufflinks 1.981        
cufflinks 2.884       High
cufflinks 1.988        
cufflinks 2.804       High
cufflinks 2.299        
cufflinks 2.186        
cufflinks 2.786       High
cufflinks 1.919        

0 Strain