Gene : Glyma.04G220500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31301:SF2 - LOB DOMAIN-CONTAINING PROTEIN 15 Genomic Order:  2205
Name:  ? Glyma.04G220500 Secondary Identifier:  ? PAC:30488855
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G220500 0.5kb upstream 0.5kb upstream 4542 true Chr04: 49114493-49119034 Glycine max
Glyma.04G220500 0.5kb upstream 0.5kb upstream 500 false Chr04: 49114493-49114992 Glycine max
Glyma.04G220500 0.5kb downstream 0.5kb downstream 4542 true Chr04: 49114993-49119534 Glycine max
Glyma.04G220500 0.5kb downstream 0.5kb downstream 500 false Chr04: 49119035-49119534 Glycine max
Glyma.04G220500 1.0kb upstream 1.0kb upstream 5042 true Chr04: 49113993-49119034 Glycine max
Glyma.04G220500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 49113993-49114992 Glycine max
Glyma.04G220500 1.0kb downstream 1.0kb downstream 5042 true Chr04: 49114993-49120034 Glycine max
Glyma.04G220500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 49119035-49120034 Glycine max
Glyma.04G220500 2.0kb upstream 2.0kb upstream 6042 true Chr04: 49112993-49119034 Glycine max
Glyma.04G220500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 49112993-49114992 Glycine max
Glyma.04G220500 2.0kb downstream 2.0kb downstream 6042 true Chr04: 49114993-49121034 Glycine max
Glyma.04G220500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 49119035-49121034 Glycine max
Glyma.04G220500 5.0kb upstream 5.0kb upstream 9042 true Chr04: 49109993-49119034 Glycine max
Glyma.04G220500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 49109993-49114992 Glycine max
Glyma.04G220500 5.0kb downstream 5.0kb downstream 9042 true Chr04: 49114993-49124034 Glycine max
Glyma.04G220500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 49119035-49124034 Glycine max
Glyma.04G220500 10.0kb upstream 10.0kb upstream 14042 true Chr04: 49104993-49119034 Glycine max
Glyma.04G220500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 49104993-49114992 Glycine max
Glyma.04G220500 10.0kb downstream 10.0kb downstream 14042 true Chr04: 49114993-49129034 Glycine max
Glyma.04G220500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 49119035-49129034 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303683 5265 Fabidae View MSA
124067191 5270 Rosid View MSA
123746231 5271 Pentapetalae View MSA
122789083 5272 Eudicot View MSA
122043702 5273 Angiosperm View MSA
121351035 5274 Embryophyte View MSA
123381985 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0956122 0.0 0.385869 Low Low
cufflinks 0.206666 0.0 1.49395 Low  
cufflinks 0.202004 0.0 0.788424 Low  
cufflinks 0.180304 0.0 1.48372    
cufflinks 3.02791 0.0 13.8439    
cufflinks 3.48571 0.0 15.5764   High
cufflinks 1.49888 0.0 8.15785    
cufflinks 2.48571 0.0 11.9997    
cufflinks 1.8244 0.0 9.45458    
cufflinks 0.108        
cufflinks 0.057        
cufflinks 0.122        
cufflinks 1.222       High
cufflinks 1.652       High
cufflinks 0.133        
cufflinks 0.058     Low  
cufflinks 0.145        
cufflinks 0.387       High
cufflinks 0.077     Low  
cufflinks 0.07     Low  
cufflinks 0.068        
cufflinks 0.085     Low  
cufflinks 0.055     Low  
cufflinks 0.051     Low  
cufflinks 0.065     Low  
cufflinks 0.257        

0 Strain