Gene : Glyma.19G178600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11630:SF47 - DNA HELICASE MCM8 Genomic Order:  1786
Name:  ? Glyma.19G178600 Secondary Identifier:  ? PAC:30514539
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G178600 0.5kb upstream 0.5kb upstream 10172 true Chr19: 43777882-43788053 Glycine max
Glyma.19G178600 0.5kb upstream 0.5kb upstream 500 false Chr19: 43787554-43788053 Glycine max
Glyma.19G178600 0.5kb downstream 0.5kb downstream 10172 true Chr19: 43777382-43787553 Glycine max
Glyma.19G178600 0.5kb downstream 0.5kb downstream 500 false Chr19: 43777382-43777881 Glycine max
Glyma.19G178600 1.0kb upstream 1.0kb upstream 10672 true Chr19: 43777882-43788553 Glycine max
Glyma.19G178600 1.0kb upstream 1.0kb upstream 1000 false Chr19: 43787554-43788553 Glycine max
Glyma.19G178600 1.0kb downstream 1.0kb downstream 10672 true Chr19: 43776882-43787553 Glycine max
Glyma.19G178600 1.0kb downstream 1.0kb downstream 1000 false Chr19: 43776882-43777881 Glycine max
Glyma.19G178600 2.0kb upstream 2.0kb upstream 11672 true Chr19: 43777882-43789553 Glycine max
Glyma.19G178600 2.0kb upstream 2.0kb upstream 2000 false Chr19: 43787554-43789553 Glycine max
Glyma.19G178600 2.0kb downstream 2.0kb downstream 11672 true Chr19: 43775882-43787553 Glycine max
Glyma.19G178600 2.0kb downstream 2.0kb downstream 2000 false Chr19: 43775882-43777881 Glycine max
Glyma.19G178600 5.0kb upstream 5.0kb upstream 14672 true Chr19: 43777882-43792553 Glycine max
Glyma.19G178600 5.0kb upstream 5.0kb upstream 5000 false Chr19: 43787554-43792553 Glycine max
Glyma.19G178600 5.0kb downstream 5.0kb downstream 14672 true Chr19: 43772882-43787553 Glycine max
Glyma.19G178600 5.0kb downstream 5.0kb downstream 5000 false Chr19: 43772882-43777881 Glycine max
Glyma.19G178600 10.0kb upstream 10.0kb upstream 19672 true Chr19: 43777882-43797553 Glycine max
Glyma.19G178600 10.0kb upstream 10.0kb upstream 10000 false Chr19: 43787554-43797553 Glycine max
Glyma.19G178600 10.0kb downstream 10.0kb downstream 19672 true Chr19: 43767882-43787553 Glycine max
Glyma.19G178600 10.0kb downstream 10.0kb downstream 10000 false Chr19: 43767882-43777881 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304036 5265 Fabidae View MSA
124061184 5270 Rosid View MSA
123738833 5271 Pentapetalae View MSA
122795718 5272 Eudicot View MSA
122042688 5273 Angiosperm View MSA
121346609 5274 Embryophyte View MSA
123424518 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.110177 0.0 0.53882 Low Low
cufflinks 1.73197 0.0 7.23176    
cufflinks 0.326129 0.0 1.51377    
cufflinks 0.599646 0.0 3.33965    
cufflinks 2.77651 0.0 11.925   High
cufflinks 1.06954 0.0 3.9511    
cufflinks 0.557007 0.0 3.33583    
cufflinks 0.697205 0.0 2.97278    
cufflinks 1.65752 0.0 7.12638    
cufflinks 0.075     Low  
cufflinks 0.044     Low Low
cufflinks 0.089     Low  
cufflinks 0.428       High
cufflinks 0.607       High
cufflinks 0.053        
cufflinks 0.154        
cufflinks 0.039     Low Low
cufflinks 0.078     Low  
cufflinks 0.297       High
cufflinks 0.127        
cufflinks 0.06     Low  
cufflinks 0.13        
cufflinks 0.199        
cufflinks 0.057     Low  
cufflinks 0.139        
cufflinks 0.094        

0 Strain