Gene : Glyma.04G170400 G. max Wm82.a2.v1
Defline:  (1 of 4) KOG1508 - DNA replication factor/protein phosphatase inhibitor SET/SPR-2 Genomic Order:  1704
Name:  ? Glyma.04G170400 Secondary Identifier:  ? PAC:30489731
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G170400 0.5kb upstream 0.5kb upstream 5473 true Chr04: 42656909-42662381 Glycine max
Glyma.04G170400 0.5kb upstream 0.5kb upstream 500 false Chr04: 42656909-42657408 Glycine max
Glyma.04G170400 0.5kb downstream 0.5kb downstream 5473 true Chr04: 42657409-42662881 Glycine max
Glyma.04G170400 0.5kb downstream 0.5kb downstream 500 false Chr04: 42662382-42662881 Glycine max
Glyma.04G170400 1.0kb upstream 1.0kb upstream 5973 true Chr04: 42656409-42662381 Glycine max
Glyma.04G170400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 42656409-42657408 Glycine max
Glyma.04G170400 1.0kb downstream 1.0kb downstream 5973 true Chr04: 42657409-42663381 Glycine max
Glyma.04G170400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 42662382-42663381 Glycine max
Glyma.04G170400 2.0kb upstream 2.0kb upstream 6973 true Chr04: 42655409-42662381 Glycine max
Glyma.04G170400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 42655409-42657408 Glycine max
Glyma.04G170400 2.0kb downstream 2.0kb downstream 6973 true Chr04: 42657409-42664381 Glycine max
Glyma.04G170400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 42662382-42664381 Glycine max
Glyma.04G170400 5.0kb upstream 5.0kb upstream 9973 true Chr04: 42652409-42662381 Glycine max
Glyma.04G170400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 42652409-42657408 Glycine max
Glyma.04G170400 5.0kb downstream 5.0kb downstream 9973 true Chr04: 42657409-42667381 Glycine max
Glyma.04G170400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 42662382-42667381 Glycine max
Glyma.04G170400 10.0kb upstream 10.0kb upstream 14973 true Chr04: 42647409-42662381 Glycine max
Glyma.04G170400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 42647409-42657408 Glycine max
Glyma.04G170400 10.0kb downstream 10.0kb downstream 14973 true Chr04: 42657409-42672381 Glycine max
Glyma.04G170400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 42662382-42672381 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307535 5265 Fabidae View MSA
124073119 5270 Rosid View MSA
123751340 5271 Pentapetalae View MSA
122794280 5272 Eudicot View MSA
122049668 5273 Angiosperm View MSA
121348262 5274 Embryophyte View MSA
123426622 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 41.0018 0.0 147.602 High  
cufflinks 75.2436 0.0 297.752 High  
cufflinks 29.6619 0.0 101.786 High Low
cufflinks 57.8552 0.0 215.445 High  
cufflinks 67.2788 0.0 257.924 High  
cufflinks 41.4136 0.0 145.799 High  
cufflinks 107.538 0.0 472.143 High High
cufflinks 49.2273 0.0 177.773 High  
cufflinks 58.807 0.0 218.499 High  
cufflinks 2.298        
cufflinks 0.597       Low
cufflinks 3.39        
cufflinks 5.455       High
cufflinks 7.738     High High
cufflinks 1.185        
cufflinks 1.719        
cufflinks 1.502        
cufflinks 3.466        
cufflinks 4.322       High
cufflinks 1.058        
cufflinks 0.803       Low
cufflinks 1.469        
cufflinks 2.311        
cufflinks 0.557       Low
cufflinks 1.507        
cufflinks 1.252        

0 Strain