Gene : Glyma.19G170400 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR22838 - WD REPEAT PROTEIN 26-RELATED Genomic Order:  1704
Name:  ? Glyma.19G170400 Secondary Identifier:  ? PAC:30511870
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G170400 0.5kb upstream 0.5kb upstream 7611 true Chr19: 43111932-43119542 Glycine max
Glyma.19G170400 0.5kb upstream 0.5kb upstream 500 false Chr19: 43119043-43119542 Glycine max
Glyma.19G170400 0.5kb downstream 0.5kb downstream 7611 true Chr19: 43111432-43119042 Glycine max
Glyma.19G170400 0.5kb downstream 0.5kb downstream 500 false Chr19: 43111432-43111931 Glycine max
Glyma.19G170400 1.0kb upstream 1.0kb upstream 8111 true Chr19: 43111932-43120042 Glycine max
Glyma.19G170400 1.0kb upstream 1.0kb upstream 1000 false Chr19: 43119043-43120042 Glycine max
Glyma.19G170400 1.0kb downstream 1.0kb downstream 8111 true Chr19: 43110932-43119042 Glycine max
Glyma.19G170400 1.0kb downstream 1.0kb downstream 1000 false Chr19: 43110932-43111931 Glycine max
Glyma.19G170400 2.0kb upstream 2.0kb upstream 9111 true Chr19: 43111932-43121042 Glycine max
Glyma.19G170400 2.0kb upstream 2.0kb upstream 2000 false Chr19: 43119043-43121042 Glycine max
Glyma.19G170400 2.0kb downstream 2.0kb downstream 9111 true Chr19: 43109932-43119042 Glycine max
Glyma.19G170400 2.0kb downstream 2.0kb downstream 2000 false Chr19: 43109932-43111931 Glycine max
Glyma.19G170400 5.0kb upstream 5.0kb upstream 12111 true Chr19: 43111932-43124042 Glycine max
Glyma.19G170400 5.0kb upstream 5.0kb upstream 5000 false Chr19: 43119043-43124042 Glycine max
Glyma.19G170400 5.0kb downstream 5.0kb downstream 12111 true Chr19: 43106932-43119042 Glycine max
Glyma.19G170400 5.0kb downstream 5.0kb downstream 5000 false Chr19: 43106932-43111931 Glycine max
Glyma.19G170400 10.0kb upstream 10.0kb upstream 17111 true Chr19: 43111932-43129042 Glycine max
Glyma.19G170400 10.0kb upstream 10.0kb upstream 10000 false Chr19: 43119043-43129042 Glycine max
Glyma.19G170400 10.0kb downstream 10.0kb downstream 17111 true Chr19: 43101932-43119042 Glycine max
Glyma.19G170400 10.0kb downstream 10.0kb downstream 10000 false Chr19: 43101932-43111931 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307186 5265 Fabidae View MSA
124068172 5270 Rosid View MSA
123740658 5271 Pentapetalae View MSA
122788774 5272 Eudicot View MSA
122043991 5273 Angiosperm View MSA
121310222 5274 Embryophyte View MSA
123426468 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.40838 0.0 32.2545   High
cufflinks 4.42785 0.0 19.7981   Low
cufflinks 9.01131 0.0 41.4717   High
cufflinks 5.20511 0.0 23.8392    
cufflinks 4.50043 0.0 21.8882   Low
cufflinks 5.10823 0.0 23.4724    
cufflinks 8.45956 0.0 35.8437   High
cufflinks 6.01306 0.0 26.9517    
cufflinks 5.05628 0.0 23.0453    
cufflinks 0.394       Low
cufflinks 1.128        
cufflinks 0.596        
cufflinks 0.375       Low
cufflinks 0.352       Low
cufflinks 1.135       High
cufflinks 0.563        
cufflinks 0.435        
cufflinks 0.503        
cufflinks 0.565        
cufflinks 0.698        
cufflinks 2.453       High
cufflinks 0.659        
cufflinks 0.574        
cufflinks 1.04        
cufflinks 0.688        
cufflinks 1.157       High

0 Strain