Gene : Glyma.19G171100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24106:SF146 - RNI-LIKE SUPERFAMILY PROTEIN Genomic Order:  1711
Name:  ? Glyma.19G171100 Secondary Identifier:  ? PAC:30511702
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G171100 0.5kb upstream 0.5kb upstream 7727 true Chr19: 43232054-43239780 Glycine max
Glyma.19G171100 0.5kb upstream 0.5kb upstream 500 false Chr19: 43232054-43232553 Glycine max
Glyma.19G171100 0.5kb downstream 0.5kb downstream 7727 true Chr19: 43232554-43240280 Glycine max
Glyma.19G171100 0.5kb downstream 0.5kb downstream 500 false Chr19: 43239781-43240280 Glycine max
Glyma.19G171100 1.0kb upstream 1.0kb upstream 8227 true Chr19: 43231554-43239780 Glycine max
Glyma.19G171100 1.0kb upstream 1.0kb upstream 1000 false Chr19: 43231554-43232553 Glycine max
Glyma.19G171100 1.0kb downstream 1.0kb downstream 8227 true Chr19: 43232554-43240780 Glycine max
Glyma.19G171100 1.0kb downstream 1.0kb downstream 1000 false Chr19: 43239781-43240780 Glycine max
Glyma.19G171100 2.0kb upstream 2.0kb upstream 9227 true Chr19: 43230554-43239780 Glycine max
Glyma.19G171100 2.0kb upstream 2.0kb upstream 2000 false Chr19: 43230554-43232553 Glycine max
Glyma.19G171100 2.0kb downstream 2.0kb downstream 9227 true Chr19: 43232554-43241780 Glycine max
Glyma.19G171100 2.0kb downstream 2.0kb downstream 2000 false Chr19: 43239781-43241780 Glycine max
Glyma.19G171100 5.0kb upstream 5.0kb upstream 12227 true Chr19: 43227554-43239780 Glycine max
Glyma.19G171100 5.0kb upstream 5.0kb upstream 5000 false Chr19: 43227554-43232553 Glycine max
Glyma.19G171100 5.0kb downstream 5.0kb downstream 12227 true Chr19: 43232554-43244780 Glycine max
Glyma.19G171100 5.0kb downstream 5.0kb downstream 5000 false Chr19: 43239781-43244780 Glycine max
Glyma.19G171100 10.0kb upstream 10.0kb upstream 17227 true Chr19: 43222554-43239780 Glycine max
Glyma.19G171100 10.0kb upstream 10.0kb upstream 10000 false Chr19: 43222554-43232553 Glycine max
Glyma.19G171100 10.0kb downstream 10.0kb downstream 17227 true Chr19: 43232554-43249780 Glycine max
Glyma.19G171100 10.0kb downstream 10.0kb downstream 10000 false Chr19: 43239781-43249780 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305677 5265 Fabidae View MSA
124050272 5270 Rosid View MSA
123739993 5271 Pentapetalae View MSA
122792810 5272 Eudicot View MSA
122043021 5273 Angiosperm View MSA
121348154 5274 Embryophyte View MSA
123380748 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.43299 0.0 22.9106    
cufflinks 6.8138 0.0 18.763    
cufflinks 11.8678 0.0 31.7372   High
cufflinks 6.87232 0.0 18.9181    
cufflinks 4.92592 0.0 14.0445    
cufflinks 4.26616 0.0 12.3321   Low
cufflinks 6.56523 0.0 18.2003    
cufflinks 6.19688 0.0 17.2013    
cufflinks 5.18951 0.0 14.6652    
cufflinks 1.814        
cufflinks 1.471        
cufflinks 2.944        
cufflinks 1.676        
cufflinks 1.385        
cufflinks 1.231       Low
cufflinks 2.928        
cufflinks 1.035       Low
cufflinks 2.419        
cufflinks 2.661        
cufflinks 4.082       High
cufflinks 1.116       Low
cufflinks 3.807       High
cufflinks 2.606        
cufflinks 1.648        
cufflinks 3.341       High
cufflinks 1.021       Low

0 Strain