Gene : Glyma.04G195900 G. max Wm82.a2.v1
Defline:  (1 of 20) PF04669 - Polysaccharide biosynthesis (Polysacc_synt_4) Genomic Order:  1959
Name:  ? Glyma.04G195900 Secondary Identifier:  ? PAC:30487967
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G195900 0.5kb upstream 0.5kb upstream 1410 true Chr04: 46782820-46784229 Glycine max
Glyma.04G195900 0.5kb upstream 0.5kb upstream 500 false Chr04: 46783730-46784229 Glycine max
Glyma.04G195900 0.5kb downstream 0.5kb downstream 1410 true Chr04: 46782320-46783729 Glycine max
Glyma.04G195900 0.5kb downstream 0.5kb downstream 500 false Chr04: 46782320-46782819 Glycine max
Glyma.04G195900 1.0kb upstream 1.0kb upstream 1910 true Chr04: 46782820-46784729 Glycine max
Glyma.04G195900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 46783730-46784729 Glycine max
Glyma.04G195900 1.0kb downstream 1.0kb downstream 1910 true Chr04: 46781820-46783729 Glycine max
Glyma.04G195900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 46781820-46782819 Glycine max
Glyma.04G195900 2.0kb upstream 2.0kb upstream 2910 true Chr04: 46782820-46785729 Glycine max
Glyma.04G195900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 46783730-46785729 Glycine max
Glyma.04G195900 2.0kb downstream 2.0kb downstream 2910 true Chr04: 46780820-46783729 Glycine max
Glyma.04G195900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 46780820-46782819 Glycine max
Glyma.04G195900 5.0kb upstream 5.0kb upstream 5910 true Chr04: 46782820-46788729 Glycine max
Glyma.04G195900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 46783730-46788729 Glycine max
Glyma.04G195900 5.0kb downstream 5.0kb downstream 5910 true Chr04: 46777820-46783729 Glycine max
Glyma.04G195900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 46777820-46782819 Glycine max
Glyma.04G195900 10.0kb upstream 10.0kb upstream 10910 true Chr04: 46782820-46793729 Glycine max
Glyma.04G195900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 46783730-46793729 Glycine max
Glyma.04G195900 10.0kb downstream 10.0kb downstream 10910 true Chr04: 46772820-46783729 Glycine max
Glyma.04G195900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 46772820-46782819 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250651 5265 Fabidae View MSA
123993769 5270 Rosid View MSA
123748972 5271 Pentapetalae View MSA
122787958 5272 Eudicot View MSA
122051372 5273 Angiosperm View MSA
121312451 5274 Embryophyte View MSA
123349624 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0585052 0.0 0.249319 Low  
cufflinks 0.0277548 0.0 0.125869 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0498519 0.0 0.215257 Low  
cufflinks 0.164615 0.0 0.66084 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.165894 0.0 0.664333 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.104       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.072     Low  
cufflinks 0.038     Low  
cufflinks 0.013     Low Low
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.134       High
cufflinks 0.025     Low  
cufflinks 0.076     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.095        
cufflinks 0.038     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low Low
cufflinks 0.0     Not Expressed Not Expressed

0 Strain