Gene : Glyma.04G195100 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11595 - ELONGATION FACTOR 1-BETA Genomic Order:  1951
Name:  ? Glyma.04G195100 Secondary Identifier:  ? PAC:30490561
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G195100 0.5kb upstream 0.5kb upstream 3136 true Chr04: 46703454-46706589 Glycine max
Glyma.04G195100 0.5kb upstream 0.5kb upstream 500 false Chr04: 46703454-46703953 Glycine max
Glyma.04G195100 0.5kb downstream 0.5kb downstream 3136 true Chr04: 46703954-46707089 Glycine max
Glyma.04G195100 0.5kb downstream 0.5kb downstream 500 false Chr04: 46706590-46707089 Glycine max
Glyma.04G195100 1.0kb upstream 1.0kb upstream 3636 true Chr04: 46702954-46706589 Glycine max
Glyma.04G195100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 46702954-46703953 Glycine max
Glyma.04G195100 1.0kb downstream 1.0kb downstream 3636 true Chr04: 46703954-46707589 Glycine max
Glyma.04G195100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 46706590-46707589 Glycine max
Glyma.04G195100 2.0kb upstream 2.0kb upstream 4636 true Chr04: 46701954-46706589 Glycine max
Glyma.04G195100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 46701954-46703953 Glycine max
Glyma.04G195100 2.0kb downstream 2.0kb downstream 4636 true Chr04: 46703954-46708589 Glycine max
Glyma.04G195100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 46706590-46708589 Glycine max
Glyma.04G195100 5.0kb upstream 5.0kb upstream 7636 true Chr04: 46698954-46706589 Glycine max
Glyma.04G195100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 46698954-46703953 Glycine max
Glyma.04G195100 5.0kb downstream 5.0kb downstream 7636 true Chr04: 46703954-46711589 Glycine max
Glyma.04G195100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 46706590-46711589 Glycine max
Glyma.04G195100 10.0kb upstream 10.0kb upstream 12636 true Chr04: 46693954-46706589 Glycine max
Glyma.04G195100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 46693954-46703953 Glycine max
Glyma.04G195100 10.0kb downstream 10.0kb downstream 12636 true Chr04: 46703954-46716589 Glycine max
Glyma.04G195100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 46706590-46716589 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305154 5265 Fabidae View MSA
124068548 5270 Rosid View MSA
123736505 5271 Pentapetalae View MSA
122786417 5272 Eudicot View MSA
122045471 5273 Angiosperm View MSA
121346032 5274 Embryophyte View MSA
123425760 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 86.6111 0.0 249.837 High  
cufflinks 86.5206 0.0 249.912 High  
cufflinks 51.2705 0.0 140.524 High Low
cufflinks 71.3142 0.0 201.381 High  
cufflinks 179.966 0.0 586.91 High High
cufflinks 129.826 0.0 399.209 High  
cufflinks 188.822 0.0 621.065 High High
cufflinks 109.089 0.0 326.521 High  
cufflinks 118.99 0.0 360.442 High  
cufflinks 52.627     High  
cufflinks 19.161     High Low
cufflinks 35.552     High  
cufflinks 121.522     High High
cufflinks 187.109     High High
cufflinks 26.832     High  
cufflinks 37.614     High  
cufflinks 32.487     High  
cufflinks 43.068     High  
cufflinks 49.658     High  
cufflinks 30.515     High  
cufflinks 24.764     High  
cufflinks 31.907     High  
cufflinks 40.684     High  
cufflinks 21.959     High Low
cufflinks 37.078     High  
cufflinks 32.072     High  

0 Strain