Gene : Glyma.04G193500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10836//PTHR10836:SF44 - GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE Genomic Order:  1935
Name:  ? Glyma.04G193500 Secondary Identifier:  ? PAC:30489615
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ANAEROFRUCAT-PWY Glycine max pathologic  
Gmax ANAGLYCOLYSIS-PWY Glycine max pathologic  
Gmax GLUCONEO-PWY Glycine max pathologic  
Gmax PWY-1042 Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax SUCSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G193500 0.5kb upstream 0.5kb upstream 3454 true Chr04: 46510758-46514211 Glycine max
Glyma.04G193500 0.5kb upstream 0.5kb upstream 500 false Chr04: 46510758-46511257 Glycine max
Glyma.04G193500 0.5kb downstream 0.5kb downstream 3454 true Chr04: 46511258-46514711 Glycine max
Glyma.04G193500 0.5kb downstream 0.5kb downstream 500 false Chr04: 46514212-46514711 Glycine max
Glyma.04G193500 1.0kb upstream 1.0kb upstream 3954 true Chr04: 46510258-46514211 Glycine max
Glyma.04G193500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 46510258-46511257 Glycine max
Glyma.04G193500 1.0kb downstream 1.0kb downstream 3954 true Chr04: 46511258-46515211 Glycine max
Glyma.04G193500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 46514212-46515211 Glycine max
Glyma.04G193500 2.0kb upstream 2.0kb upstream 4954 true Chr04: 46509258-46514211 Glycine max
Glyma.04G193500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 46509258-46511257 Glycine max
Glyma.04G193500 2.0kb downstream 2.0kb downstream 4954 true Chr04: 46511258-46516211 Glycine max
Glyma.04G193500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 46514212-46516211 Glycine max
Glyma.04G193500 5.0kb upstream 5.0kb upstream 7954 true Chr04: 46506258-46514211 Glycine max
Glyma.04G193500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 46506258-46511257 Glycine max
Glyma.04G193500 5.0kb downstream 5.0kb downstream 7954 true Chr04: 46511258-46519211 Glycine max
Glyma.04G193500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 46514212-46519211 Glycine max
Glyma.04G193500 10.0kb upstream 10.0kb upstream 12954 true Chr04: 46501258-46514211 Glycine max
Glyma.04G193500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 46501258-46511257 Glycine max
Glyma.04G193500 10.0kb downstream 10.0kb downstream 12954 true Chr04: 46511258-46524211 Glycine max
Glyma.04G193500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 46514212-46524211 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314378 5265 Fabidae View MSA
124074393 5270 Rosid View MSA
123750297 5271 Pentapetalae View MSA
122795499 5272 Eudicot View MSA
122051601 5273 Angiosperm View MSA
121347451 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 265.366 0.0 1024.43 High  
cufflinks 185.327 0.0 647.248 High  
cufflinks 147.839 0.0 490.81 High Low
cufflinks 190.813 0.0 671.997 High  
cufflinks 273.247 0.0 1066.06 High  
cufflinks 187.278 0.0 659.338 High  
cufflinks 334.711 0.0 1392.13 High High
cufflinks 238.275 0.0 893.231 High  
cufflinks 184.335 0.0 645.445 High  
cufflinks 193.755     High High
cufflinks 64.013     High Low
cufflinks 110.741     High  
cufflinks 218.026     High High
cufflinks 278.041     High High
cufflinks 92.873     High  
cufflinks 99.77     High  
cufflinks 71.298     High  
cufflinks 153.747     High  
cufflinks 148.15     High  
cufflinks 73.695     High  
cufflinks 101.18     High  
cufflinks 90.78     High  
cufflinks 120.671     High  
cufflinks 53.41     High Low
cufflinks 84.651     High  
cufflinks 89.181     High  

0 Strain