Gene : Glyma.04G197900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13468:SF6 - DEK DOMAIN-CONTAINING CHROMATIN ASSOCIATED PROTEIN Genomic Order:  1979
Name:  ? Glyma.04G197900 Secondary Identifier:  ? PAC:30488613
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G197900 0.5kb upstream 0.5kb upstream 6968 true Chr04: 46996522-47003489 Glycine max
Glyma.04G197900 0.5kb upstream 0.5kb upstream 500 false Chr04: 46996522-46997021 Glycine max
Glyma.04G197900 0.5kb downstream 0.5kb downstream 6968 true Chr04: 46997022-47003989 Glycine max
Glyma.04G197900 0.5kb downstream 0.5kb downstream 500 false Chr04: 47003490-47003989 Glycine max
Glyma.04G197900 1.0kb upstream 1.0kb upstream 7468 true Chr04: 46996022-47003489 Glycine max
Glyma.04G197900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 46996022-46997021 Glycine max
Glyma.04G197900 1.0kb downstream 1.0kb downstream 7468 true Chr04: 46997022-47004489 Glycine max
Glyma.04G197900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 47003490-47004489 Glycine max
Glyma.04G197900 2.0kb upstream 2.0kb upstream 8468 true Chr04: 46995022-47003489 Glycine max
Glyma.04G197900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 46995022-46997021 Glycine max
Glyma.04G197900 2.0kb downstream 2.0kb downstream 8468 true Chr04: 46997022-47005489 Glycine max
Glyma.04G197900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 47003490-47005489 Glycine max
Glyma.04G197900 5.0kb upstream 5.0kb upstream 11468 true Chr04: 46992022-47003489 Glycine max
Glyma.04G197900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 46992022-46997021 Glycine max
Glyma.04G197900 5.0kb downstream 5.0kb downstream 11468 true Chr04: 46997022-47008489 Glycine max
Glyma.04G197900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 47003490-47008489 Glycine max
Glyma.04G197900 10.0kb upstream 10.0kb upstream 16468 true Chr04: 46987022-47003489 Glycine max
Glyma.04G197900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 46987022-46997021 Glycine max
Glyma.04G197900 10.0kb downstream 10.0kb downstream 16468 true Chr04: 46997022-47013489 Glycine max
Glyma.04G197900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 47003490-47013489 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301714 5265 Fabidae View MSA
124072894 5270 Rosid View MSA
123748946 5271 Pentapetalae View MSA
122791456 5272 Eudicot View MSA
122042773 5273 Angiosperm View MSA
121346519 5274 Embryophyte View MSA
123426401 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.90673 0.0 27.4576    
cufflinks 20.1956 0.0 72.3928 High High
cufflinks 6.63506 0.0 23.7001   Low
cufflinks 9.14635 0.0 36.4624    
cufflinks 10.213 0.0 35.1242    
cufflinks 7.26719 0.0 25.601    
cufflinks 13.7564 0.0 47.9661    
cufflinks 8.53335 0.0 25.628    
cufflinks 9.75237 0.0 33.4439    
cufflinks 1.87        
cufflinks 0.713       Low
cufflinks 1.948        
cufflinks 2.784        
cufflinks 3.218        
cufflinks 1.258        
cufflinks 3.289        
cufflinks 1.425        
cufflinks 1.776        
cufflinks 5.309       High
cufflinks 2.785        
cufflinks 1.077       Low
cufflinks 3.172        
cufflinks 4.55       High
cufflinks 0.832       Low
cufflinks 2.8        
cufflinks 1.406        

0 Strain